Commits · dev · meldb / concepts-processing · GitLab

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Apr 29, 2025
- (fix) diff tests where not configured correctly, with the right old phen directory · adc48e95
  mjbonifa authored 1 month ago
  
  adc48e95
Apr 23, 2025
- (feat) flag no metadata in phen map output · 47dcd2eb
  Jakub Dylag authored 1 month ago
  
  47dcd2eb
- (feat) flag do not translate in phen map · c5bbb8ac
  Jakub Dylag authored 1 month ago
  
  c5bbb8ac
Mar 29, 2025
- (fix) fixed diff so it works with list of paths rather than a single file.... · 4eae3f81
  mjbonifa authored 2 months ago
  4eae3f81
- (docs) updates to api documentation · 7ce48fbd
  mjbonifa authored 2 months ago
  
  7ce48fbd
Mar 26, 2025
- (Docs) Simple Local workflow Example · 859d27c7
  Jakub Dylag authored 2 months ago
  
  859d27c7
Mar 25, 2025
- (fix) removed metadata from the examples, found bug in test_diff that included... · df2271e2
  mjbonifa authored 2 months ago
  df2271e2
Mar 12, 2025
- (docs) fixed config.yaml references in readme and docs · 1bdd3a79
  mjbonifa authored 3 months ago
  
  1bdd3a79
Mar 11, 2025
- temporary removal of test assertion to check outputs in diff · 90106ca4
  mjbonifa authored 3 months ago
  
  90106ca4
- updated version to 1.0.0 · 5b2ab3d2
  mjbonifa authored 3 months ago
  
  5b2ab3d2
- (docs) updated documeantion and private variables/functions. Closes #55 · 7a1fe5ce
  mjbonifa authored 3 months ago
  
  7a1fe5ce
- (docs) refactored docs. changed yaml to yaml extensions · 54204dd4
  mjbonifa authored 3 months ago
  
  54204dd4
Mar 10, 2025
- (docs) updated docs to default to google style so renders correctly · 5dd29589
  mjbonifa authored 3 months ago
  
  5dd29589
- (docs) tested publication to readthedocs. Closes #54 · 88675c27
  mjbonifa authored 3 months ago
  
  88675c27
- (docs) testing mkdocs and readthedocs integratino · e350060b
  mjbonifa authored 3 months ago
  
  e350060b
- (docs) testing mkdocs and readthedocs integratino · d366cf07
  mjbonifa authored 3 months ago
  
  d366cf07
- (docs) testing mkdocs and readthedocs integratino · 5e730492
  mjbonifa authored 3 months ago
  
  5e730492
- (docs) testing mkdocs and readthedocs integratino · 35df069d
  mjbonifa authored 3 months ago
  
  35df069d
- (fix) fixed all typing and ready for documentation · 9254ae24
  mjbonifa authored 3 months ago
  
  9254ae24
- (docs) tried sphix but compelx and not automatied. We have option of pdoc for... · a56dab99
  mjbonifa authored 3 months ago
  a56dab99
- (docs) converting pdocs to markdown · 0f84f004
  mjbonifa authored 3 months ago
  
  0f84f004
Mar 09, 2025
- (docs) initial version of md api docs · 25457a8e
  mjbonifa authored 3 months ago
  
  25457a8e
- added pdocs document generation using the command hatch run docs. Creates html... · 3f1ca235
  mjbonifa authored 3 months ago
  3f1ca235
Mar 07, 2025
- (docs) started to write the docstrings · dc326521
  mjbonifa authored 3 months ago
  
  dc326521
- (docs) added versioning instructions. Closes #8 · 63bc8de9
  mjbonifa authored 3 months ago
  
  63bc8de9
- (feature) Added forking existing remote and publishing to a new repo. Needed... · 89912789
  mjbonifa authored 3 months ago
  89912789
Mar 06, 2025
- (refactor) Updated diff workflow to provide defaults and flexibility. Closes #48 · 2d2d2a60
  mjbonifa authored 3 months ago
  
  2d2d2a60
- (fix) changed concept-set to concept-sets as more intuitive due to the plural... · 68944076
  mjbonifa authored 3 months ago
  68944076
- (fix) Changed the versioning of phenotypes to semantic versioning using the... · 9df8d5d2
  mjbonifa authored 3 months ago
  9df8d5d2
Feb 27, 2025
- fix: moved omop export to concept-sets, moved concept set csv files to... · 7fdebb00
  mjbonifa authored 3 months ago
  7fdebb00
- fix: added version message to publish · e6ab6fbc
  mjbonifa authored 3 months ago
  
  e6ab6fbc
Feb 26, 2025
- feature: added -r option to connect to a remote repo on publication. This is a... · 820b8677
  mjbonifa authored 3 months ago
  820b8677
- fix: added map definition to the config.yaml so that we know which maps are... · e549bf4b
  mjbonifa authored 3 months ago
  e549bf4b
Feb 25, 2025
- fix. removed contributing.md from mkdocs · 900c4949
  mjbonifa authored 3 months ago
  
  900c4949
- docs: moved contributing.md to root of repo · a98788bc
  mjbonifa authored 3 months ago
  
  a98788bc
- docs: added directory docs and yaml config doc file. closes #9 · 0b243914
  mjbonifa authored 3 months ago
  
  0b243914
- docs: added directory docs and yaml config doc file #9 · ae917c8d
  mjbonifa authored 3 months ago
  
  ae917c8d
- docs: added directory docs and yaml config doc file · 31a8ef93
  mjbonifa authored 3 months ago
  
  31a8ef93
- docs: added release commands to contributing.md · 33c28bbf
  mjbonifa authored 3 months ago
  
  33c28bbf
- fix: issue with commit from #10 · 46480a80
  mjbonifa authored 3 months ago
  
  46480a80