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yl1r22
COMP3217 code and result
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2c80dddb
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2c80dddb
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Jun 6, 2023
by
yl1r22
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{
"cells": [
{
"cell_type": "code",
"execution_count": 2,
"id": "6064e0b1",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
" 0 1 2 3 4 5 \\\n",
"0 70.399324 127673.0908 -49.572308 127648.0176 -169.578319 127723.2374 \n",
"\n",
" 6 7 8 9 ... 119 120 121 122 123 \\\n",
"0 65.689611 605.91099 -57.003571 626.78553 ... 0 0 0 0 0 \n",
"\n",
" 124 125 126 127 128 \n",
"0 0 0 0 0 0 \n",
"\n",
"[1 rows x 129 columns]\n"
]
}
],
"source": [
"#Import scikit-learn dataset library\n",
"#from sklearn import datasets\n",
"from sklearn.model_selection import train_test_split\n",
"from sklearn.model_selection import cross_val_score\n",
"from sklearn import svm, metrics\n",
"from sklearn.ensemble import RandomForestClassifier\n",
"import pandas as pd\n",
"import numpy as np\n",
"from joblib import dump\n",
"\n",
"\n",
"df = pd.read_csv('H:\\AI classification\\TrainingDataBinary.csv', header=None)\n",
"\n",
"print(df.head(1))\n",
"\n",
"df_feature = df.iloc[:, :128]\n",
"\n",
"df_label = df.iloc[:, 128]\n",
"\n",
"\n",
"\n",
"\n",
"#dftest = pd.read_csv('H:\\AI classification\\TestingDataBinary.csv')\n",
"\n",
"#X_test = dftest.iloc[:, :128]\n",
"\n",
"#y_test = dftest.iloc[:, 128]\n",
"\n",
"\n",
"#Load dataset\n",
"#cancer = datasets.load_breast_cancer()\n",
"\n",
"# print the names of the features\n",
"#print(\"Features: \", cancer.feature_names)\n",
"\n",
"# print the label type of cancer('malignant' 'benign')\n",
"#print(\"Labels: \", cancer.target_names)\n",
"\n",
"# print data(feature)shape\n",
"#print (cancer.data.shape)\n",
"\n",
"\n",
"# Split dataset into training set and test set\n",
"X_train, X_test, y_train, y_test = train_test_split(df_feature, df_label, test_size=0.2) # 70% training and 30% test\n",
"\n",
"\n"
]
},
{
"cell_type": "code",
"execution_count": 45,
"id": "c4bcd563",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Accuracy: 0.87\n"
]
}
],
"source": [
"#Create a svm Classifier\n",
"clf = svm.SVC(kernel='linear') # Linear Kernel\n",
"\n",
"#Train the model using the training sets\n",
"clf.fit(X_train, y_train)\n",
"\n",
"#Predict the response for test dataset\n",
"y_pred = clf.predict(X_test)\n",
"\n",
"print(\"Accuracy:\",metrics.accuracy_score(y_test, y_pred))\n"
]
},
{
"cell_type": "code",
"execution_count": 3,
"id": "cdc65331",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Accuracy: 0.9683333333333334\n"
]
}
],
"source": [
"# Create a rfc \n",
"clf1 = RandomForestClassifier(n_estimators=100, max_features=78)\n",
"# Fit\n",
"clf1.fit(X_train, y_train)\n",
"\n",
"y_pred1 = clf1.predict(X_test)\n",
"\n",
"print(\"Accuracy:\",metrics.accuracy_score(y_test, y_pred1))\n",
"\n"
]
},
{
"cell_type": "code",
"execution_count": 4,
"id": "12a28ae3",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Scores [0.97604167 0.978125 0.971875 0.97604167 0.98125 ]\n",
"Mean Scores 0.9766666666666666\n"
]
}
],
"source": [
"\n",
"scores1 = cross_val_score(clf1, X_train, y_train, cv=5)\n",
"\n",
"print(\"Scores\", scores1)\n",
"print(\"Mean Scores\", np.mean(scores1))"
]
},
{
"cell_type": "code",
"execution_count": 5,
"id": "16ad1a95",
"metadata": {
"scrolled": true
},
"outputs": [
{
"data": {
"text/plain": [
"['H:/AI classification/RFC_part1.pkl']"
]
},
"execution_count": 5,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"#dump the model\n",
"dump(clf1, 'H:/AI classification/RFC_part1.pkl')"
]
},
{
"cell_type": "code",
"execution_count": 6,
"id": "06c58b04",
"metadata": {},
"outputs": [],
"source": [
"# Load testing dataset\n",
"test_data=pd.read_csv('H:\\AI classification\\TestingDataBinary.csv', header=None)\n",
"# predict dataset\n",
"predictions = clf1.predict(test_data)\n",
"predictions_df = pd.DataFrame(predictions)\n",
"# write the result to dataset\n",
"result = pd.concat([test_data,predictions_df], axis=1)\n",
"#create a csv dcument\n",
"result.to_csv('H:/AI classification/test_pre1.csv', index = False, header = False)\n"
]
},
{
"cell_type": "code",
"execution_count": 7,
"id": "c089a3e7",
"metadata": {
"scrolled": true
},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"[1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1\n",
" 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1\n",
" 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]\n"
]
}
],
"source": [
"print(predictions)"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "47105ba9",
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.9.12"
}
},
"nbformat": 4,
"nbformat_minor": 5
}
%% Cell type:code id:6064e0b1 tags:
```
python
#Import scikit-learn dataset library
#from sklearn import datasets
from
sklearn.model_selection
import
train_test_split
from
sklearn.model_selection
import
cross_val_score
from
sklearn
import
svm
,
metrics
from
sklearn.ensemble
import
RandomForestClassifier
import
pandas
as
pd
import
numpy
as
np
from
joblib
import
dump
df
=
pd
.
read_csv
(
'
H:\AI classification\TrainingDataBinary.csv
'
,
header
=
None
)
print
(
df
.
head
(
1
))
df_feature
=
df
.
iloc
[:,
:
128
]
df_label
=
df
.
iloc
[:,
128
]
#dftest = pd.read_csv('H:\AI classification\TestingDataBinary.csv')
#X_test = dftest.iloc[:, :128]
#y_test = dftest.iloc[:, 128]
#Load dataset
#cancer = datasets.load_breast_cancer()
# print the names of the features
#print("Features: ", cancer.feature_names)
# print the label type of cancer('malignant' 'benign')
#print("Labels: ", cancer.target_names)
# print data(feature)shape
#print (cancer.data.shape)
# Split dataset into training set and test set
X_train
,
X_test
,
y_train
,
y_test
=
train_test_split
(
df_feature
,
df_label
,
test_size
=
0.2
)
# 70% training and 30% test
```
%% Output
0 1 2 3 4 5 \
0 70.399324 127673.0908 -49.572308 127648.0176 -169.578319 127723.2374
6 7 8 9 ... 119 120 121 122 123 \
0 65.689611 605.91099 -57.003571 626.78553 ... 0 0 0 0 0
124 125 126 127 128
0 0 0 0 0 0
[1 rows x 129 columns]
%% Cell type:code id:c4bcd563 tags:
```
python
#Create a svm Classifier
clf
=
svm
.
SVC
(
kernel
=
'
linear
'
)
# Linear Kernel
#Train the model using the training sets
clf
.
fit
(
X_train
,
y_train
)
#Predict the response for test dataset
y_pred
=
clf
.
predict
(
X_test
)
print
(
"
Accuracy:
"
,
metrics
.
accuracy_score
(
y_test
,
y_pred
))
```
%% Output
Accuracy: 0.87
%% Cell type:code id:cdc65331 tags:
```
python
# Create a rfc
clf1
=
RandomForestClassifier
(
n_estimators
=
100
,
max_features
=
78
)
# Fit
clf1
.
fit
(
X_train
,
y_train
)
y_pred1
=
clf1
.
predict
(
X_test
)
print
(
"
Accuracy:
"
,
metrics
.
accuracy_score
(
y_test
,
y_pred1
))
```
%% Output
Accuracy: 0.9683333333333334
%% Cell type:code id:12a28ae3 tags:
```
python
scores1
=
cross_val_score
(
clf1
,
X_train
,
y_train
,
cv
=
5
)
print
(
"
Scores
"
,
scores1
)
print
(
"
Mean Scores
"
,
np
.
mean
(
scores1
))
```
%% Output
Scores [0.97604167 0.978125 0.971875 0.97604167 0.98125 ]
Mean Scores 0.9766666666666666
%% Cell type:code id:16ad1a95 tags:
```
python
#dump the model
dump
(
clf1
,
'
H:/AI classification/RFC_part1.pkl
'
)
```
%% Output
['H:/AI classification/RFC_part1.pkl']
%% Cell type:code id:06c58b04 tags:
```
python
# Load testing dataset
test_data
=
pd
.
read_csv
(
'
H:\AI classification\TestingDataBinary.csv
'
,
header
=
None
)
# predict dataset
predictions
=
clf1
.
predict
(
test_data
)
predictions_df
=
pd
.
DataFrame
(
predictions
)
# write the result to dataset
result
=
pd
.
concat
([
test_data
,
predictions_df
],
axis
=
1
)
#create a csv dcument
result
.
to_csv
(
'
H:/AI classification/test_pre1.csv
'
,
index
=
False
,
header
=
False
)
```
%% Cell type:code id:c089a3e7 tags:
```
python
print
(
predictions
)
```
%% Output
[1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1
1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0]
%% Cell type:code id:47105ba9 tags:
```
python
```
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