@@ -158,10 +158,10 @@ The `"concept_sets"` object defines the structure and rules for grouping input c
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@@ -158,10 +158,10 @@ The `"concept_sets"` object defines the structure and rules for grouping input c
-**`version`**: Identifies the version of the concept set definitions being used. This can help track changes over time.
-**`version`**: Identifies the version of the concept set definitions being used. This can help track changes over time.
-**`columns`**: Describes the mapping of specific column names in the CSV file to attributes of the concept sets. Supported keys are:
-**`concept_set`**: Defines a list of concept_set objects along with their attributes:
-**`concept_set_name`**: Maps to the column specifying the name of the concept set.
-**`concept_set_name`**: Specifies the name of the concept set.
-**`concept_set_status`**: Maps to the column indicating the status of the concept set. Only concept sets the **"AGREED"** status will be outputted!
-**`concept_set_status`**: Indicates the status of the concept set. Only concept sets the **"AGREED"** status will be outputted!
-**`metadata`**: A list of additional columns in the CSV file that should be copied to the output for descriptive or contextual purposes.
-**`metadata`** (optional): A list of additional properties that will be copied into the output. Can be used for descriptive or contextual purposes.
The `"codes"` object specifies the source files containing input codes and assigns them to the corresponding concept sets through the `"concept_set"` field.
The `"codes"` object specifies the source files containing input codes and assigns them to the corresponding concept sets through the `"concept_set"` field.
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@@ -170,13 +170,21 @@ The `"codes"` object specifies the source files containing input codes and assig
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@@ -170,13 +170,21 @@ The `"codes"` object specifies the source files containing input codes and assig
```json
```json
{
{
"concept_sets":{
"concept_sets":{
"file":"PHEN_summary_working.csv",
"version":"3.2.10",
"version":"3.2.10",
"omop":{
"columns":{
"vocabulary_id":"MELDB",
"concept_set_name":"CONCEPT NAME ",
"vocabulary_name":"Multidisciplinary Ecosystem to study Lifecourse Determinants and Prevention of Early-onset Burdensome Multimorbidity",