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jos1g14
woRkflow
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95c3a028
Commit
95c3a028
authored
Jun 23, 2020
by
Ben Anderson
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Merge branch 'syllabusDev' into 'master'
Outline syllabus See merge request SERG/workflow!3
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# A workshop or short course syllabus
## why
Why not?
To provide a (number) of session(s) on our woRkflow and the tools we use to organise/collaborate/generally make us work more effectively.
## what
An outline of topics covered by such a course might be as follows:
*
Why bother?
*
Organisation and collaboration
*
Reproducibility
*
Documentation as-you-go (link to R packages)
*
Collaboration tools - overview
*
Communication: MS Teams/Slack
<->
and (Git) integration
*
*
Github/Gitlab
*
Repositories (set up) - integration with R
*
Collaboration - forking (hell) - branching - developing - merging
——R Specific (optional?) — —
*
Repository structure - recommendations/best practice
*
R tools
*
RStudio:
*
Git/RStudio integration: git made simple (for command line/Terminal phobics)
*
Packages: containers for functions (+ other useful stuff) & documentation as-you-go
*
Drake: for workflow management and reproducibility
*
R tools UoS specific
*
Soton RStudio server
## who
Everyone!
## how
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