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Created with Raphaël 2.2.04Feb5Dec123Nov9829Oct15Sep88Aug7531Jul292826221514121098729Jun27229May2827262Apr17Mar121196229Feb2827262422141315Jan1110987653220Dec19171311Update LICENSEmastermasterUpdate README.mdAdded doi for Maynard Smith and Sabeti papersAdded the doi for the Gautier paperAdded more detail to the final paragraphMerge branch 'master' of github.com:chorscroft/zalphaEdit Travis linkAdded a paragraph and references about other packagesUpdate README.mdUpdate README.mdAdd Travis badge to READMEAdded a section on dependenciesCreated .travis.ymlNow includes community guidelines sectionAdded note about the changes to how max_bin is handledAdded documentation about max_distAdded test for when a pair of SNPs in a window have a genetic distance greater than the maximum bin in the LD profileAdded code to force pairs of SNPs with a genetic distance greater than the biggest bin in the LD profile into the maximum binNew developments to functions equal_vector, L_plus_R and Zalpha_allMoved calculation of LR and L_plus_R so they are always calculated. Edit to final warning to not reference LRAdded definition of L and R to Zalpha_all documentationChnage to L_plus_R so that it will return zero rather than NA when n<2 in choose(n,2)Updated dateMinor wording changesAdded Tim's ORCiDAdded ORCiDs and made minor text changesMention of phased dataUpdated statement of need and reworded sentencesRemove quotes around referencesadded "ands" between authorsChange code to be more efficientIgnore paper folderIncrement version for developmentUpdate version to 0.2.0v0.2.0v0.2.0Updated to version 0.2.0First draft of paperRemoved NEWS.mdNew comments for tests on new versionAdded reference to PLINK, clarified missing values and edited sentence on correlation causesEdited description of function and format of @seealso section of documentation
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