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Computational Genetics
Zalpha
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v0.2.0
v0.1.0
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Created with Raphaël 2.2.0
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Update LICENSE
master
master
Update README.md
Added doi for Maynard Smith and Sabeti papers
Added the doi for the Gautier paper
Added more detail to the final paragraph
Merge branch 'master' of github.com:chorscroft/zalpha
Edit Travis link
Added a paragraph and references about other packages
Update README.md
Update README.md
Add Travis badge to README
Added a section on dependencies
Created .travis.yml
Now includes community guidelines section
Added note about the changes to how max_bin is handled
Added documentation about max_dist
Added test for when a pair of SNPs in a window have a genetic distance greater than the maximum bin in the LD profile
Added code to force pairs of SNPs with a genetic distance greater than the biggest bin in the LD profile into the maximum bin
New developments to functions equal_vector, L_plus_R and Zalpha_all
Moved calculation of LR and L_plus_R so they are always calculated. Edit to final warning to not reference LR
Added definition of L and R to Zalpha_all documentation
Chnage to L_plus_R so that it will return zero rather than NA when n<2 in choose(n,2)
Updated date
Minor wording changes
Added Tim's ORCiD
Added ORCiDs and made minor text changes
Mention of phased data
Updated statement of need and reworded sentences
Remove quotes around references
added "ands" between authors
Change code to be more efficient
Ignore paper folder
Increment version for development
Update version to 0.2.0
v0.2.0
v0.2.0
Updated to version 0.2.0
First draft of paper
Removed NEWS.md
New comments for tests on new version
Added reference to PLINK, clarified missing values and edited sentence on correlation causes
Edited description of function and format of @seealso section of documentation
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