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Updated docs to resolve conflicts between autodoc function and abaqus imports.... 

Updated docs to resolve conflicts between autodoc function and abaqus imports. Updated readme by adding logo
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<h1>Source code for LoadCase.Step</h1><div class="highlight"><pre>
<span></span><span class="kn">from</span> <span class="nn">abaqus</span> <span class="k">import</span> <span class="o">*</span>
<span class="kn">from</span> <span class="nn">abaqusConstants</span> <span class="k">import</span> <span class="o">*</span>
<span class="kn">from</span> <span class="nn">step</span> <span class="k">import</span> <span class="o">*</span>
<div class="viewcode-block" id="Step"><a class="viewcode-back" href="../../LoadCase.html#LoadCase.Step.Step">[docs]</a><span class="k">def</span> <span class="nf">Step</span><span class="p">(</span><span class="o">**</span><span class="n">kwargs</span><span class="p">):</span>
<span class="sd">&quot;&quot;&quot;</span>
<span class="sd"> Create buckling analysis and define all the parameters</span>
<span class="sd"> :param kwargs: model parameters</span>
<span class="sd"> :type kwargs: dict</span>
<span class="sd"> :return: Null</span>
<span class="sd"> :rtype: Null</span>
<span class="sd"> &quot;&quot;&quot;</span>
<span class="c1"># Define a standard buckling step with Subspace solver</span>
<span class="n">modelname</span> <span class="o">=</span> <span class="n">kwargs</span><span class="p">[</span><span class="s1">&#39;modelname&#39;</span><span class="p">]</span>
<span class="n">StepName</span> <span class="o">=</span> <span class="n">kwargs</span><span class="p">[</span><span class="s1">&#39;StepName&#39;</span><span class="p">]</span>
<span class="n">NumberOfEigs</span> <span class="o">=</span> <span class="n">kwargs</span><span class="p">[</span><span class="s1">&#39;NumberOfEigs&#39;</span><span class="p">]</span>
<span class="n">mdb</span><span class="o">.</span><span class="n">models</span><span class="p">[</span><span class="n">modelname</span><span class="p">]</span><span class="o">.</span><span class="n">BuckleStep</span><span class="p">(</span><span class="n">name</span><span class="o">=</span><span class="n">StepName</span><span class="p">,</span>
<span class="n">previous</span><span class="o">=</span><span class="s1">&#39;Initial&#39;</span><span class="p">,</span>
<span class="n">numEigen</span><span class="o">=</span><span class="n">NumberOfEigs</span><span class="p">,</span>
<span class="n">vectors</span><span class="o">=</span><span class="mi">2</span><span class="o">*</span><span class="n">NumberOfEigs</span><span class="p">,</span>
<span class="n">maxIterations</span><span class="o">=</span><span class="mi">300</span><span class="p">)</span>
<span class="c1"># Create a list of output variables</span>
<span class="n">mdb</span><span class="o">.</span><span class="n">models</span><span class="p">[</span><span class="n">modelname</span><span class="p">]</span><span class="o">.</span><span class="n">FieldOutputRequest</span><span class="p">(</span>
<span class="n">name</span><span class="o">=</span><span class="s1">&#39;output&#39;</span><span class="p">,</span> <span class="n">createStepName</span><span class="o">=</span><span class="n">StepName</span><span class="p">,</span>
<span class="n">variables</span><span class="o">=</span><span class="p">(</span>
<span class="s1">&#39;S&#39;</span><span class="p">,</span> <span class="s1">&#39;MISES&#39;</span><span class="p">,</span> <span class="s1">&#39;MISESMAX&#39;</span><span class="p">,</span> <span class="s1">&#39;TSHR&#39;</span><span class="p">,</span> <span class="s1">&#39;CTSHR&#39;</span><span class="p">,</span> <span class="s1">&#39;ALPHA&#39;</span><span class="p">,</span> <span class="s1">&#39;TRIAX&#39;</span><span class="p">,</span> <span class="s1">&#39;VS&#39;</span><span class="p">,</span> <span class="s1">&#39;PS&#39;</span><span class="p">,</span>
<span class="s1">&#39;CS11&#39;</span><span class="p">,</span> <span class="s1">&#39;SSAVG&#39;</span><span class="p">,</span> <span class="s1">&#39;MISESONLY&#39;</span><span class="p">,</span> <span class="s1">&#39;PRESSONLY&#39;</span><span class="p">,</span> <span class="s1">&#39;E&#39;</span><span class="p">,</span> <span class="s1">&#39;VE&#39;</span><span class="p">,</span> <span class="s1">&#39;PE&#39;</span><span class="p">,</span> <span class="s1">&#39;VEEQ&#39;</span><span class="p">,</span> <span class="s1">&#39;PEEQ&#39;</span><span class="p">,</span>
<span class="s1">&#39;PEEQT&#39;</span><span class="p">,</span> <span class="s1">&#39;PEEQMAX&#39;</span><span class="p">,</span> <span class="s1">&#39;PEMAG&#39;</span><span class="p">,</span> <span class="s1">&#39;PEQC&#39;</span><span class="p">,</span> <span class="s1">&#39;EE&#39;</span><span class="p">,</span> <span class="s1">&#39;IE&#39;</span><span class="p">,</span> <span class="s1">&#39;THE&#39;</span><span class="p">,</span> <span class="s1">&#39;NE&#39;</span><span class="p">,</span> <span class="s1">&#39;LE&#39;</span><span class="p">,</span> <span class="s1">&#39;ER&#39;</span><span class="p">,</span>
<span class="s1">&#39;SE&#39;</span><span class="p">,</span> <span class="s1">&#39;SPE&#39;</span><span class="p">,</span> <span class="s1">&#39;SEPE&#39;</span><span class="p">,</span> <span class="s1">&#39;SEE&#39;</span><span class="p">,</span> <span class="s1">&#39;SEP&#39;</span><span class="p">,</span> <span class="s1">&#39;SALPHA&#39;</span><span class="p">,</span> <span class="s1">&#39;U&#39;</span><span class="p">,</span> <span class="s1">&#39;ENER&#39;</span><span class="p">,</span> <span class="s1">&#39;ELEN&#39;</span><span class="p">,</span>
<span class="s1">&#39;ELEDEN&#39;</span><span class="p">))</span></div>
</pre></div>
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LoadCase package LoadCase package
================ ================
This module contains functions that define interaction between various parts of the mitotic spindle,
create compressive loads and specify boundary conditions as well as formulate the buckling step analysis.
Submodules Submodules
---------- ----------
......
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Parts package Parts package
============= =============
This module contains functions that generate geometry and mechanical properties
of the standard elements of the mitotic spindle such as centrosome, microtubule and microtubule connectors
Submodules Submodules
---------- ----------
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SpindleAssembly package SpindleAssembly package
======================= =======================
This module contains functions that import and connect standard spindle parts into a
structural assembly of the whole spindle.
Submodules Submodules
---------- ----------
......
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SpindleMesh package SpindleMesh package
=================== ===================
This module contains functions that generate finite element mesh on each part of the mitotic spindle assembly
Submodules Submodules
---------- ----------
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datExtract module
=================
.. automodule:: datExtract
:members:
:undoc-members:
:show-inheritance:
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...@@ -3,7 +3,8 @@ ...@@ -3,7 +3,8 @@
You can adapt this file completely to your liking, but it should at least You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive. contain the root `toctree` directive.
.. figure:: images/intro.png .. figure:: images/cell.pdf
:width: 350px
:align: center :align: center
Welcome to the interactive documentation of the Spindle FEA application Welcome to the interactive documentation of the Spindle FEA application
......
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