[fix] check errors in OMOP export of config1.yaml
[INFO] - Exporting phenotype /home/mjbonifa/datahdd/brcbat/derived_datasets/mjbonifa/concepts-processing/workspace/phen at version latest
[INFO] - Validating phenotype: /home/mjbonifa/datahdd/brcbat/derived_datasets/mjbonifa/concepts-processing/workspace/phen
[INFO] - Phenotype validated successfully
[INFO] - Exporting 2 map files
[INFO] - Processing 1 of 2: /home/mjbonifa/datahdd/brcbat/derived_datasets/mjbonifa/concepts-processing/workspace/phen/map/read2.csv
[ERROR] - ERROR: Some Read Codes do not exist in OMOP Database
[INFO] - Processing 2 of 2: /home/mjbonifa/datahdd/brcbat/derived_datasets/mjbonifa/concepts-processing/workspace/phen/map/read3.csv
[ERROR] - ERROR: Some None Codes do not exist in OMOP Database
Edited by mjbonifa