Review and refactor configuration file

  • need py converter rather than manual
  • need to refactor fields
    • status field looks like metadata and is not used in the processing
    • omop to omop_vocab with sub elements remove vocabulary
    • metadata to concept set level
      • to id

      • description
      • type
      • annotation
    • metadata to process
      • date,
      • confirmed to clinical review
      • notes should be date ordered
      • workflow (review, process, import) each with state (todo, doing, done) and date

Do we need coding list in concept set, currently a mess.

Edited by mjbonifa