From 3a6da0b8338da8106f0f4d94d98644cf5b644f6d Mon Sep 17 00:00:00 2001
From: Michael Boniface <m.j.boniface@soton.ac.uk>
Date: Sat, 15 Feb 2025 17:37:41 +0000
Subject: [PATCH] added example based on clinicalcodes.org, needs more work to
 demonstrate mappings but it's a starting point

---
 .../clinical-codes-org/About the source.docx  | Bin 0 -> 18153 bytes
 .../Where this code list comes from .docx     | Bin 0 -> 18564 bytes
 .../Alcohol intake/res47-alcohol-intake.csv   |  37 +
 .../Where this code list comes from .docx     | Bin 0 -> 18538 bytes
 .../res47-physical-activity.csv               |  35 +
 .../Where this code list comes from .docx     | Bin 0 -> 18501 bytes
 .../Smoking status/res56-smoking-status.csv   |  63 ++
 .../Where this code list comes from .docx     | Bin 0 -> 18531 bytes
 .../res52-cardiovascular-events-icd10.csv     |  34 +
 .../Where this code list comes from .docx     | Bin 0 -> 18670 bytes
 ..._PH62_ver_124_concepts_20230719T112819.csv |  26 +
 .../Where this code list comes from .docx     | Bin 0 -> 18501 bytes
 .../res201-did-not-attend-appointment.csv     | 112 +++
 .../Where this code list comes from .docx     | Bin 0 -> 18548 bytes
 ...PH223_ver_446_concepts_20230719T114228.csv |  28 +
 .../Where this code list comes from .docx     | Bin 0 -> 18503 bytes
 ...res176-palliative-and-end-of-life-care.csv |  55 ++
 .../Where this code list comes from .docx     | Bin 0 -> 18526 bytes
 ...1091_ver_2385_concepts_20230719T122902.csv | 104 +++
 .../Where this code list comes from .docx     | Bin 0 -> 18506 bytes
 .../res38-personality-disorder.csv            |  79 +++
 .../Where this code list comes from .docx     | Bin 0 -> 18481 bytes
 .../Self harm/res41-self-harm.csv             | 262 +++++++
 .../Where this code list comes from .docx     | Bin 0 -> 18514 bytes
 .../Abdominal pain/res176-abdominal-pain.csv  |  77 ++
 .../Where this code list comes from .docx     | Bin 0 -> 18790 bytes
 .../Symptom code lists/Falls/res178-fall.csv  | 100 +++
 .../Falls/res202-falls-outcome.csv            | 666 ++++++++++++++++++
 .../Where this code list comes from .docx     | Bin 0 -> 18501 bytes
 .../Fatigue/res175-fatigue.csv                |  48 ++
 .../Where this code list comes from .docx     | Bin 0 -> 18646 bytes
 .../Headache/res175-headache.csv              | 115 +++
 .../Where this code list comes from .docx     | Bin 0 -> 18516 bytes
 .../Incontinence/res11-incontinence.csv       |  86 +++
 .../Where this code list comes from .docx     | Bin 0 -> 18645 bytes
 .../Musculoskeletal pain/res175-msk-pain.csv  |  52 ++
 .../Where this code list comes from .docx     | Bin 0 -> 18518 bytes
 .../res55-neuropathic_pain.csv                |  25 +
 .../Where this code list comes from .docx     | Bin 0 -> 18639 bytes
 .../Sleep problems/res175-sleep-problems.csv  | 193 +++++
 .../Where this code list comes from .docx     | Bin 0 -> 18489 bytes
 .../Stress/res175-stress.csv                  |  86 +++
 .../Where this code list comes from .docx     | Bin 0 -> 18525 bytes
 ..._PH87_ver_174_concepts_20230719T113229.csv | 493 +++++++++++++
 .../Where this code list comes from .docx     | Bin 0 -> 18533 bytes
 ...PH331_ver_662_concepts_20230719T121545.csv | 270 +++++++
 example/phenotype_config.json                 |  79 +++
 omop.py                                       |   2 +-
 48 files changed, 3126 insertions(+), 1 deletion(-)
 create mode 100644 example/clinical-codes-org/About the source.docx
 create mode 100644 example/clinical-codes-org/Behaviours code lists/Alcohol intake/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Behaviours code lists/Alcohol intake/res47-alcohol-intake.csv
 create mode 100644 example/clinical-codes-org/Behaviours code lists/Physical activity/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Behaviours code lists/Physical activity/res47-physical-activity.csv
 create mode 100644 example/clinical-codes-org/Behaviours code lists/Smoking status/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Behaviours code lists/Smoking status/res56-smoking-status.csv
 create mode 100644 example/clinical-codes-org/Cardiovascular events (ICD10)/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Cardiovascular events (ICD10)/res52-cardiovascular-events-icd10.csv
 create mode 100644 example/clinical-codes-org/Motor neurone disease/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Motor neurone disease/phenotype_PH62_ver_124_concepts_20230719T112819.csv
 create mode 100644 example/clinical-codes-org/Non-attendance codes/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Non-attendance codes/res201-did-not-attend-appointment.csv
 create mode 100644 example/clinical-codes-org/Obsessive Compulsive Disorder/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Obsessive Compulsive Disorder/phenotype_PH223_ver_446_concepts_20230719T114228.csv
 create mode 100644 example/clinical-codes-org/Palliative care codes/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Palliative care codes/res176-palliative-and-end-of-life-care.csv
 create mode 100644 example/clinical-codes-org/Peptic ulcer/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Peptic ulcer/phenotype_PH1091_ver_2385_concepts_20230719T122902.csv
 create mode 100644 example/clinical-codes-org/Personality disorders/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Personality disorders/res38-personality-disorder.csv
 create mode 100644 example/clinical-codes-org/Self harm/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Self harm/res41-self-harm.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Abdominal pain/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Abdominal pain/res176-abdominal-pain.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Falls/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Falls/res178-fall.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Falls/res202-falls-outcome.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Fatigue/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Fatigue/res175-fatigue.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Headache/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Headache/res175-headache.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Incontinence/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Incontinence/res11-incontinence.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Musculoskeletal pain/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Musculoskeletal pain/res175-msk-pain.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Neuropathic pain/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Neuropathic pain/res55-neuropathic_pain.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Sleep problems/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Sleep problems/res175-sleep-problems.csv
 create mode 100644 example/clinical-codes-org/Symptom code lists/Stress/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Symptom code lists/Stress/res175-stress.csv
 create mode 100644 example/clinical-codes-org/Tuberculosis/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Tuberculosis/phenotype_PH87_ver_174_concepts_20230719T113229.csv
 create mode 100644 example/clinical-codes-org/Urinary tract stones/Where this code list comes from .docx
 create mode 100644 example/clinical-codes-org/Urinary tract stones/phenotype_PH331_ver_662_concepts_20230719T121545.csv
 create mode 100644 example/phenotype_config.json

diff --git a/example/clinical-codes-org/About the source.docx b/example/clinical-codes-org/About the source.docx
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diff --git a/example/clinical-codes-org/Behaviours code lists/Alcohol intake/Where this code list comes from .docx b/example/clinical-codes-org/Behaviours code lists/Alcohol intake/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..75b25caf91969c25ed0b0cb414e965bb90643c51
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diff --git a/example/clinical-codes-org/Behaviours code lists/Alcohol intake/res47-alcohol-intake.csv b/example/clinical-codes-org/Behaviours code lists/Alcohol intake/res47-alcohol-intake.csv
new file mode 100644
index 0000000..7bac5dd
--- /dev/null
+++ b/example/clinical-codes-org/Behaviours code lists/Alcohol intake/res47-alcohol-intake.csv	
@@ -0,0 +1,37 @@
+code,coding_system,description,entity,list_name,upload_date
+136..00,Read,Alcohol consumption,test,451 - res47: Alcohol intake,25/07/2016
+1361.11,Read,Non drinker alcohol,test,451 - res47: Alcohol intake,25/07/2016
+1361.12,Read,Non-drinker alcohol,test,451 - res47: Alcohol intake,25/07/2016
+1362.11,Read,Drinks rarely,test,451 - res47: Alcohol intake,25/07/2016
+1362.12,Read,Drinks occasionally,test,451 - res47: Alcohol intake,25/07/2016
+136a.00,Read,Increasing risk drinking,test,451 - res47: Alcohol intake,25/07/2016
+136A.00,Read,Ex-trivial drinker (<1u/day),test,451 - res47: Alcohol intake,25/07/2016
+136b.00,Read,Feels should cut down drinking,test,451 - res47: Alcohol intake,25/07/2016
+136B.00,Read,Ex-light drinker - (1-2u/day),test,451 - res47: Alcohol intake,25/07/2016
+136c.00,Read,Higher risk drinking,test,451 - res47: Alcohol intake,25/07/2016
+136C.00,Read,Ex-moderate drinker - (3-6u/d),test,451 - res47: Alcohol intake,25/07/2016
+136d.00,Read,Lower risk drinking,test,451 - res47: Alcohol intake,25/07/2016
+136D.00,Read,Ex-heavy drinker - (7-9u/day),test,451 - res47: Alcohol intake,25/07/2016
+136e.00,Read,Declines to state current alcohol consumption,test,451 - res47: Alcohol intake,25/07/2016
+136E.00,Read,Ex-very heavy drinker-(>9u/d),test,451 - res47: Alcohol intake,25/07/2016
+136F.00,Read,Spirit drinker,test,451 - res47: Alcohol intake,25/07/2016
+136G.00,Read,Beer drinker,test,451 - res47: Alcohol intake,25/07/2016
+136H.00,Read,Drinks beer and spirits,test,451 - res47: Alcohol intake,25/07/2016
+136I.00,Read,Drinks wine,test,451 - res47: Alcohol intake,25/07/2016
+136J.00,Read,Social drinker,test,451 - res47: Alcohol intake,25/07/2016
+136K.00,Read,Alcohol intake above recommended sensible limits,test,451 - res47: Alcohol intake,25/07/2016
+136L.00,Read,Alcohol intake within recommended sensible limits,test,451 - res47: Alcohol intake,25/07/2016
+136M.00,Read,Current non drinker,test,451 - res47: Alcohol intake,25/07/2016
+136N.00,Read,Light drinker,test,451 - res47: Alcohol intake,25/07/2016
+136O.00,Read,Moderate drinker,test,451 - res47: Alcohol intake,25/07/2016
+136P.00,Read,Heavy drinker,test,451 - res47: Alcohol intake,25/07/2016
+136Q.00,Read,Very heavy drinker,test,451 - res47: Alcohol intake,25/07/2016
+136R.00,Read,Binge drinker,test,451 - res47: Alcohol intake,25/07/2016
+136S.00,Read,Hazardous alcohol use,test,451 - res47: Alcohol intake,25/07/2016
+136T.00,Read,Harmful alcohol use,test,451 - res47: Alcohol intake,25/07/2016
+136V.00,Read,Alcohol units per week,test,451 - res47: Alcohol intake,25/07/2016
+136W.00,Read,Alcohol misuse,test,451 - res47: Alcohol intake,25/07/2016
+136X.00,Read,Alcohol units consumed on heaviest drinking day,test,451 - res47: Alcohol intake,25/07/2016
+136Y.00,Read,Drinks in morning to get rid of hangover,test,451 - res47: Alcohol intake,25/07/2016
+136Z.00,Read,Alcohol consumption NOS,test,451 - res47: Alcohol intake,25/07/2016
+E23..12,Read,Alcohol problem drinking,test,451 - res47: Alcohol intake,25/07/2016
\ No newline at end of file
diff --git a/example/clinical-codes-org/Behaviours code lists/Physical activity/Where this code list comes from .docx b/example/clinical-codes-org/Behaviours code lists/Physical activity/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..5413b668043d248eac2df0368b34ddfedc623e5a
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diff --git a/example/clinical-codes-org/Behaviours code lists/Physical activity/res47-physical-activity.csv b/example/clinical-codes-org/Behaviours code lists/Physical activity/res47-physical-activity.csv
new file mode 100644
index 0000000..113dbd1
--- /dev/null
+++ b/example/clinical-codes-org/Behaviours code lists/Physical activity/res47-physical-activity.csv	
@@ -0,0 +1,35 @@
+code,coding_system,description,entity,list_name,upload_date
+1381,Read,Exercise physically impossible,test,450 - res47: Physical activity,25/07/2016
+1382,Read,Avoids even trivial exercise,test,450 - res47: Physical activity,25/07/2016
+1383,Read,Enjoys light exercise,test,450 - res47: Physical activity,25/07/2016
+1384,Read,Enjoys moderate exercise,test,450 - res47: Physical activity,25/07/2016
+1385,Read,Enjoys heavy exercise,test,450 - res47: Physical activity,25/07/2016
+1386,Read,Competitive athlete,test,450 - res47: Physical activity,25/07/2016
+1388,Read,Aerobic exercise 0 times/week,test,450 - res47: Physical activity,25/07/2016
+1389,Read,Aerobic exercise 1 time/week,test,450 - res47: Physical activity,25/07/2016
+138a.00,Read,GPPAQ physical activity index: moderately active,test,450 - res47: Physical activity,25/07/2016
+138A.00,Read,Aerobic exercise 2 times/week,test,450 - res47: Physical activity,25/07/2016
+138b.00,Read,GPPAQ physical activity index: active,test,450 - res47: Physical activity,25/07/2016
+138B.00,Read,Aerobic exercise 3+ times/week,test,450 - res47: Physical activity,25/07/2016
+138C.00,Read,Anaerobic exercise 0 times/wk,test,450 - res47: Physical activity,25/07/2016
+138D.00,Read,Anaerobic exercise 1 time/week,test,450 - res47: Physical activity,25/07/2016
+138E.00,Read,Anaerobic exercise 2 times/wk,test,450 - res47: Physical activity,25/07/2016
+138F.00,Read,Anaerobic exercise 3+ times/wk,test,450 - res47: Physical activity,25/07/2016
+138G.00,Read,Attends exercise classes,test,450 - res47: Physical activity,25/07/2016
+138H.00,Read,Enjoys intermediate exercise,test,450 - res47: Physical activity,25/07/2016
+138I.00,Read,FITT activity level 0; no mod/vig activity of 20 mins duratn,test,450 - res47: Physical activity,25/07/2016
+138J.00,Read,FITT activity level 1; 1-4 occas of mod/vig activit in 4 wks,test,450 - res47: Physical activity,25/07/2016
+138K.00,Read,FITT activity level 2; 5-11 occas of mod/vig activt in 4 wks,test,450 - res47: Physical activity,25/07/2016
+138L.00,Read,FITT activity level 3; 12+ occas of mod activity in 4 weeks,test,450 - res47: Physical activity,25/07/2016
+138M.00,Read,FITT activity level 4; 12+ occas of mod/vig activit in 4 wks,test,450 - res47: Physical activity,25/07/2016
+138N.00,Read,FITT activity level 5; 12+ occas of vig activity in 4 weeks,test,450 - res47: Physical activity,25/07/2016
+138O.00,Read,Takes inadequate exercise,test,450 - res47: Physical activity,25/07/2016
+138P.00,Read,Aerobic exercise three times a week,test,450 - res47: Physical activity,25/07/2016
+138Q.00,Read,Aerobic exercise four times a week,test,450 - res47: Physical activity,25/07/2016
+138R.00,Read,Aerobic exercise five times a week,test,450 - res47: Physical activity,25/07/2016
+138S.00,Read,Declined referral to physical exercise programme,test,450 - res47: Physical activity,25/07/2016
+138T.00,Read,30 mins/day of at least mod intensty physc activity >=5 week,test,450 - res47: Physical activity,25/07/2016
+138V.00,Read,30 minutes a day of at least moderate intensity walk >=5week,test,450 - res47: Physical activity,25/07/2016
+138W.00,Read,Less than 30 mins/day of at least mod int physc act >=5 week,test,450 - res47: Physical activity,25/07/2016
+138X.00,Read,GPPAQ physical activity index: inactive,test,450 - res47: Physical activity,25/07/2016
+138Y.00,Read,GPPAQ physical activity index: moderately inactive,test,450 - res47: Physical activity,25/07/2016
\ No newline at end of file
diff --git a/example/clinical-codes-org/Behaviours code lists/Smoking status/Where this code list comes from .docx b/example/clinical-codes-org/Behaviours code lists/Smoking status/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..1d681412967fb72aada16d97707428c171c538d6
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HcmV?d00001

diff --git a/example/clinical-codes-org/Behaviours code lists/Smoking status/res56-smoking-status.csv b/example/clinical-codes-org/Behaviours code lists/Smoking status/res56-smoking-status.csv
new file mode 100644
index 0000000..59c1972
--- /dev/null
+++ b/example/clinical-codes-org/Behaviours code lists/Smoking status/res56-smoking-status.csv	
@@ -0,0 +1,63 @@
+code,coding_system,description,entity,list_name,upload_date,status
+137..00,Read,Tobacco consumption,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1371,Read,Never smoked tobacco,diagnostic,649 - res56: smoking status,16/03/2017,never smoker
+137..11,Read,Smoker - amount smoked,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1371.11,Read,Non-smoker,diagnostic,649 - res56: smoking status,16/03/2017,never smoker
+1372,Read,Trivial smoker - < 1 cig/day,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1372.11,Read,Occasional smoker,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1373,Read,Light smoker - 1-9 cigs/day,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1374,Read,Moderate smoker - 10-19 cigs/d,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1375,Read,Heavy smoker - 20-39 cigs/day,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1376,Read,Very heavy smoker - 40+cigs/d,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+1377,Read,Ex-trivial smoker (<1/day),diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+1378,Read,Ex-light smoker (1-9/day),diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+1379,Read,Ex-moderate smoker (10-19/day),diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137a.00,Read,Pipe tobacco consumption,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137A.00,Read,Ex-heavy smoker (20-39/day),diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137b.00,Read,Ready to stop smoking,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137B.00,Read,Ex-very heavy smoker (40+/day),diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137c.00,Read,Thinking about stopping smoking,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137C.00,Read,Keeps trying to stop smoking,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137d.00,Read,Not interested in stopping smoking,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137D.00,Read,Admitted tobacco cons untrue ?,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137e.00,Read,Smoking restarted,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137E.00,Read,Tobacco consumption unknown,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137F.00,Read,Ex-smoker - amount unknown,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137G.00,Read,Trying to give up smoking,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137H.00,Read,Pipe smoker,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137I.00,Read,Passive smoker,diagnostic,649 - res56: smoking status,16/03/2017,never smoker
+137j.00,Read,Ex-cigarette smoker,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137J.00,Read,Cigar smoker,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137K.00,Read,Stopped smoking,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137K000,Read,Recently stopped smoking,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137l.00,Read,Ex roll-up cigarette smoker,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137L.00,Read,Current non-smoker,diagnostic,649 - res56: smoking status,16/03/2017,never smoker
+137m.00,Read,Failed attempt to stop smoking,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137M.00,Read,Rolls own cigarettes,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137N.00,Read,Ex pipe smoker,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137O.00,Read,Ex cigar smoker,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137P.00,Read,Cigarette smoker,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137P.11,Read,Smoker,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137Q.00,Read,Smoking started,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137Q.11,Read,Smoking restarted,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137R.00,Read,Current smoker,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137S.00,Read,Ex smoker,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137T.00,Read,Date ceased smoking,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+137U.00,Read,Not a passive smoker,diagnostic,649 - res56: smoking status,16/03/2017,never smoker
+137V.00,Read,Smoking reduced,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137W.00,Read,Chews tobacco,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137X.00,Read,Cigarette consumption,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137Y.00,Read,Cigar consumption,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+137Z.00,Read,Tobacco consumption NOS,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+8CAL.00,Read,Smoking cessation advice,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+8H7i.00,Read,Referral to smoking cessation advisor,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+8HkQ.00,Read,Referral to NHS stop smoking service,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+8HTK.00,Read,Referral to stop-smoking clinic,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+8IAj.00,Read,Smoking cessation advice declined,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+9km..00,Read,Ex-smoker annual review - enhanced services administration,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+9km..11,Read,Ex-smoker annual review,diagnostic,649 - res56: smoking status,16/03/2017,ex smoker
+9kn..00,Read,Non-smoker annual review - enhanced services administration,diagnostic,649 - res56: smoking status,16/03/2017,never smoker
+9kn..11,Read,Non-smoker annual review,diagnostic,649 - res56: smoking status,16/03/2017,never smoker
+9ko..00,Read,Current smoker annual review - enhanced services admin,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+9ko..11,Read,Current smoker annual review,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
+9NS0200,Read,Referral for smoking cessation service offered,diagnostic,649 - res56: smoking status,16/03/2017,current smoker
\ No newline at end of file
diff --git a/example/clinical-codes-org/Cardiovascular events (ICD10)/Where this code list comes from .docx b/example/clinical-codes-org/Cardiovascular events (ICD10)/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..783d16b15bd5b4747ba5515e8d3579653c9d1799
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diff --git a/example/clinical-codes-org/Cardiovascular events (ICD10)/res52-cardiovascular-events-icd10.csv b/example/clinical-codes-org/Cardiovascular events (ICD10)/res52-cardiovascular-events-icd10.csv
new file mode 100644
index 0000000..c06f1be
--- /dev/null
+++ b/example/clinical-codes-org/Cardiovascular events (ICD10)/res52-cardiovascular-events-icd10.csv	
@@ -0,0 +1,34 @@
+code,coding_system,description,entity,list_name,upload_date
+I21,ICD-10,Acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I21.0,ICD-10,Acute transmural myocardial infarction of anterior wall,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I21.1,ICD-10,Acute transmural myocardial infarction of inferior wall,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I21.2,ICD-10,Acute transmural myocardial infarction of other sites,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I21.3,ICD-10,Acute transmural myocardial infarction of unspecified site,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I21.4,ICD-10,Acute subendocardial myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I21.9,ICD-10,Acute myocardial infarction; unspecified,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I22,ICD-10,Subsequent myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I22.0,ICD-10,Subsequent myocardial infarction of anterior wall,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I22.1,ICD-10,Subsequent myocardial infarction of inferior wall,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I22.8,ICD-10,Subsequent myocardial infarction of other sites,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I22.9,ICD-10,Subsequent myocardial infarction of unspecified site,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23,ICD-10,Certain current complications following acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.0,ICD-10,Haemopericardium as current complication following acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.1,ICD-10,Atrial septal defect as current complication following acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.2,ICD-10,Ventricular septal defect as current complication following acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.3,ICD-10,Rupture of cardiac wall without haemopericardium as current complication following acute myocardial ,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.4,ICD-10,Rupture of chordae tendineae as current complication following acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.5,ICD-10,Rupture of papillary muscle as current complication following acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.6,ICD-10,Thrombosis of atrium; auricular appendage; and ventricle as current complications following acute my,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I23.8,ICD-10,Other current complications following acute myocardial infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63,ICD-10,Cerebral infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.0,ICD-10,Cerebral infarction due to thrombosis of precerebral arteries,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.1,ICD-10,Cerebral infarction due to embolism of precerebral arteries,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.2,ICD-10,Cerebral infarction due to unspecified occlusion or stenosis of precerebral arteries,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.3,ICD-10,Cerebral infarction due to thrombosis of cerebral arteries,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.4,ICD-10,Cerebral infarction due to embolism of cerebral arteries,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.5,ICD-10,Cerebral infarction due to unspecified occlusion or stenosis of cerebral arteries,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.6,ICD-10,Cerebral infarction due to cerebral venous thrombosis; nonpyogenic,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.8,ICD-10,Other cerebral infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I63.9,ICD-10,Cerebral infarction; unspecified,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I64,ICD-10,Stroke; not specified as haemorrhage or infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
+I64.0,ICD-10,Stroke; not specified as haemorrhage or infarction,diagnostic,624 - res52: cardiovascular events ICD10,14/12/2016
\ No newline at end of file
diff --git a/example/clinical-codes-org/Motor neurone disease/Where this code list comes from .docx b/example/clinical-codes-org/Motor neurone disease/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..7522774653f1fff251577b19078f026d4b44b352
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HcmV?d00001

diff --git a/example/clinical-codes-org/Motor neurone disease/phenotype_PH62_ver_124_concepts_20230719T112819.csv b/example/clinical-codes-org/Motor neurone disease/phenotype_PH62_ver_124_concepts_20230719T112819.csv
new file mode 100644
index 0000000..79363ea
--- /dev/null
+++ b/example/clinical-codes-org/Motor neurone disease/phenotype_PH62_ver_124_concepts_20230719T112819.csv	
@@ -0,0 +1,26 @@
+code,description,coding_system,concept_id,concept_version_id,concept_name,phenotype_id,phenotype_version_id,phenotype_name,code_attributes
+7Q04100,Amyotrophic lateral sclerosis drugs Band 1,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '109020.0', 'Category': 'History of Motor neuron disease'}"
+F15..00,Anterior horn cell disease,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '21889.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152.00,Motor neurone disease,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '4796.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152000,Amyotrophic lateral sclerosis,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '36433.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152100,Progressive muscular atrophy,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '30987.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152111,Duchenne Aran muscular atrophy,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '7470.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152200,Progressive bulbar palsy,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '27377.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152300,Pseudobulbar palsy,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '18084.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152400,Primary lateral sclerosis,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '20845.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F152z00,Motor neurone disease NOS,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '20120.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F15y.00,Other anterior horn cell disease,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '71400.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+F15z.00,Anterior horn cell disease NOS,Read codes v2,C852,2843,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Medcode': '58729.0', 'Category': 'Diagnosis of Motor neuron disease'}"
+109020,History of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Amyotrophic lateral sclerosis drugs Band 1', 'Readcode': '7Q04100'}"
+18084,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Pseudobulbar palsy', 'Readcode': 'F152300'}"
+20120,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Motor neurone disease NOS', 'Readcode': 'F152z00'}"
+20845,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Primary lateral sclerosis', 'Readcode': 'F152400'}"
+21889,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Anterior horn cell disease', 'Readcode': 'F15..00'}"
+27377,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Progressive bulbar palsy', 'Readcode': 'F152200'}"
+30987,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Progressive muscular atrophy', 'Readcode': 'F152100'}"
+36433,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Amyotrophic lateral sclerosis', 'Readcode': 'F152000'}"
+4796,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Motor neurone disease', 'Readcode': 'F152.00'}"
+58729,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Anterior horn cell disease NOS', 'Readcode': 'F15z.00'}"
+71400,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Other anterior horn cell disease', 'Readcode': 'F15y.00'}"
+7470,Diagnosis of Motor neuron disease,Med codes,C853,2845,Motor neuron disease - Primary care,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'ReadcodeDescr': 'Duchenne Aran muscular atrophy', 'Readcode': 'F152111'}"
+G12.2,Motor neuron disease,ICD10 codes,C854,2847,Motor neuron disease - Secondary care - Diagnoses,PH62,124,Motor neuron disease,"{'Disease': 'Motor neuron disease', 'Category': 'Diagnosis of Motor neuron disease'}"
\ No newline at end of file
diff --git a/example/clinical-codes-org/Non-attendance codes/Where this code list comes from .docx b/example/clinical-codes-org/Non-attendance codes/Where this code list comes from .docx
new file mode 100644
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zNm#QeYD*W{EMpsFvp_Ba*E{HrL2VEs8{lh;ZU8uVu$qF}enK`S#SST{AzD-D&Oog<
ikqubufb0xJ_=4R54HH&2kPcA>QHE+(28Jz8ARYjE{C_<F

literal 0
HcmV?d00001

diff --git a/example/clinical-codes-org/Non-attendance codes/res201-did-not-attend-appointment.csv b/example/clinical-codes-org/Non-attendance codes/res201-did-not-attend-appointment.csv
new file mode 100644
index 0000000..ced268d
--- /dev/null
+++ b/example/clinical-codes-org/Non-attendance codes/res201-did-not-attend-appointment.csv	
@@ -0,0 +1,112 @@
+code,coding_system,description,entity,list_name,upload_date
+68W2900,Read,Bowel scope (flexi-sig) appointment: DNA,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9HB7.00,Read,Did not attend learning disabilities annual health assessmnt,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9HB7.11,Read,Did not attend learning disabilities annual health check,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9kh2.00,Read,Did not attend extended hours clinic - ESA,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9kh2.11,Read,Did not attend extended hours clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4..00,Read,Failed encounter,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N41.00,Read,Did not attend - reason given,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N42.00,Read,Did not attend - no reason,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N42.11,Read,Patient defaulted from follow up,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N43.00,Read,Patient too late,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N44.00,Read,DNA - appointment mix-up,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N45.00,Read,Patient walked out,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N47.00,Read,Appt cancelled by patient,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4B.00,Read,Poor attender,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4C.00,Read,Failed encounter - no answer when rang back,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4D.00,Read,Failed encounter - message left with work place,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4E.00,Read,Failed encounter - message left with household member,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4f.00,Read,DNA - Did not attend podiatry clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4F.00,Read,Failed encounter - message left on answer machine,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4g.00,Read,DNA - Did not attend psychiatry clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4G.00,Read,Failed encounter - phone number unobtainable,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4h.00,Read,DNA - Did not attend peripheral vascular disease clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4H.00,Read,DNA hospital appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4i.00,Read,DNA - Did not attend substance misuse clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4I.00,Read,DNA - Did not attend diabetic clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4j.00,Read,DNA - Did not attend community psychiatric nurse review,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4J.00,Read,DNA - Did not attend cardiac clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4k.00,Read,Failed encounter - practitioner access denied,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4K.00,Read,DNA - Did not attend cholesterol clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4l.00,Read,Did not attend dietetic clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4L.00,Read,DNA - Did not attend hypertension clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4m.00,Read,Did not attend vaginal swab,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4M.00,Read,DNA - Did not attend smoking cessation clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4N.00,Read,Did not attend mental health appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4N000,Read,DNA child and adolescent mental health service appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4N100,Read,Did not attend CAMHS choice appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4N200,Read,Did not attend CAMHS partnership appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4N300,Read,Did not attend CAMHS return appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4o.00,Read,Did not attend blood test,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4p.00,Read,Did not attend diabetic retinopathy clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4Q.00,Read,DNA - Did not attend asthma clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4r.00,Read,Did not attend cognitive behaviour therapy,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4R.00,Read,DNA - Did not attend cryotherapy clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4s.00,Read,Did not attend practice nurse heart failure clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4S.00,Read,DNA - Did not attend cancer clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4t.00,Read,DNA - Did not attend mental health review,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4T.00,Read,DNA - Did not attend hyperthyroidism clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4u.00,Read,Did not attend community anticoagulation clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4v.00,Read,Did not attend weight monitoring clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4V.00,Read,DNA - Did not attend epilepsy clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4w.00,Read,Did not attend heart failure clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4W.00,Read,DNA - Did not attend COPD clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4x.00,Read,Did not attend GP chronic disease monitoring clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4X.00,Read,DNA - Did not attend stroke clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4y.00,Read,Did not attend breast screening clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4Y.00,Read,Did not attend physiotherapy appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4Z.00,Read,Failed encounter NOS,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N4z200,Read,DNA diphtheria; tetanus; acellular pertussis and polio vaccn,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9N8C.00,Read,Number of appointments missed,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NC3200,Read,Letter sent about missed general practitioner appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NFb100,Read,DNA health visitor 3 to 4 month contact with family,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NFC.00,Read,Home visit - no reply,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Ni..00,Read,Did not attend,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Ni0.00,Read,Did not attend retinal screening,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Ni1.00,Read,Did not attend renal clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Ni2.00,Read,Did not attend bowel cancer screening programme nurse clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Ni3.00,Read,Did not attend bowel cancer screening,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Ni8.00,Read,DNA cardiology spec interest general practitioner clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Ni9.00,Read,Did not attend chronic kidney disease monitoring clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nia.00,Read,Did not attend psychotherapy appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiA.00,Read,Did not attend diabetes structured education programme,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nib.00,Read,Did not attend walk in centre,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nic.00,Read,Did not attend fast track suspected cancer clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiC.00,Read,Did not attend DAFNE diabetes structured education programme,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nic000,Read,DNA fast track suspected gynaecological cancer clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nid.00,Read,Did not attend abdominal aortic aneurysm screening,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiD.00,Read,Did not attend DESMOND diabetes structured education program,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nie.00,Read,Did not attend NHS Health Check annual review,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiE.00,Read,Did not attend XPERT diabetes structured education programme,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiF.00,Read,Did not attend expert patients programme,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiG.00,Read,Did not attend minor surgery clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiH.00,Read,Did not attend hospital anticoagulation clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nij.00,Read,Did not attend postnatal examination,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiJ.00,Read,Did not attend general practitioner anticoagulant clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nik.00,Read,Did not attend counselling appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiK.00,Read,DNA hospital DMARD monitoring clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nil.00,Read,Did not attend antenatal appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiL.00,Read,DNA GP disease modifying antirheumatic drug monitor clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nim.00,Read,Did not attend nurse appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiM.00,Read,Did not attend cardiovascular disease risk assessment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nin.00,Read,Did not attend general practitioner appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiN.00,Read,DNA cardiovascular disease primary prevention programme,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nio.00,Read,Did not attend contraceptive clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiP.00,Read,Did not attend genitourinary medicine clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiS.00,Read,Did not attend NHS Health Check,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiT.00,Read,Did not attend cervical smear,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiV.00,Read,Did not attend spirometry clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiW.00,Read,Did not attend colposcopy clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiY.00,Read,Did not attend congenital heart disease clinic,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NiZ.00,Read,Did not attend diabetes foot screening,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nj..00,Read,Other failed encounter,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nj8.00,Read,Failed encounter - SMS text message delivery failure,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Nj8.11,Read,Failed encounter - SMS text message delivery failure,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9NjA.00,Read,Failed encounter - hospital appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Oe3.00,Read,Did not attend for community DMARD monitoring,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Oe3.11,Read,DNA community DMARD monitoring,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Oq9700,Read,NHSP incomplete as did not attend appointment,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9OqH000,Read,NAAASP initial screening incomplete; did not attend,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9OqH900,Read,NAAASP surveillance screening incomplete; did not attend,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9OWA.00,Read,Did not attend new patient screening,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
+9Q11.00,Read,MRC coronary screen DNA,diagnostic,1072 - res201: Did not attend appointment,26/02/2023
\ No newline at end of file
diff --git a/example/clinical-codes-org/Obsessive Compulsive Disorder/Where this code list comes from .docx b/example/clinical-codes-org/Obsessive Compulsive Disorder/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..d842c7fc2bfb4929366e4e3fa4b5ee79d940a832
GIT binary patch
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diff --git a/example/clinical-codes-org/Obsessive Compulsive Disorder/phenotype_PH223_ver_446_concepts_20230719T114228.csv b/example/clinical-codes-org/Obsessive Compulsive Disorder/phenotype_PH223_ver_446_concepts_20230719T114228.csv
new file mode 100644
index 0000000..fcbc8da
--- /dev/null
+++ b/example/clinical-codes-org/Obsessive Compulsive Disorder/phenotype_PH223_ver_446_concepts_20230719T114228.csv	
@@ -0,0 +1,28 @@
+code,description,coding_system,concept_id,concept_version_id,concept_name,phenotype_id,phenotype_version_id,phenotype_name,code_attributes
+E203.00,Obsessive-compulsive disorders,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '3208.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+E203.11,Anancastic neurosis,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '47365.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+E203000,Compulsive neurosis,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '5678.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+E203100,Obsessional neurosis,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '2030.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+E203z00,Obsessive-compulsive disorder NOS,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '15566.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42.00,[X]Obsessive - compulsive disorder,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '5304.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42.11,[X]Anankastic neurosis,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '24251.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42.12,[X]Obsessive-compulsive neurosis,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '21836.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42000,[X]Predominantly obsessional thoughts or ruminations,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '20634.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42100,[X]Predominantly compulsive acts [obsessional rituals],Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '22019.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42200,[X]Mixed obsessional thoughts and acts,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '18399.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42y00,[X]Other obsessive-compulsive disorders,Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '38809.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+Eu42z00,"[X]Obsessive-compulsive disorder, unspecified",Read codes v2,C1320,3779,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Medcode': '22721.0', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
+15566,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': 'Obsessive-compulsive disorder NOS', 'Readcode': 'E203z00'}"
+18399,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Mixed obsessional thoughts and acts', 'Readcode': 'Eu42200'}"
+2030,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': 'Obsessional neurosis', 'Readcode': 'E203100'}"
+20634,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Predominantly obsessional thoughts or ruminations', 'Readcode': 'Eu42000'}"
+21836,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Obsessive-compulsive neurosis', 'Readcode': 'Eu42.12'}"
+22019,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Predominantly compulsive acts [obsessional rituals]', 'Readcode': 'Eu42100'}"
+22721,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Obsessive-compulsive disorder, unspecified', 'Readcode': 'Eu42z00'}"
+24251,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Anankastic neurosis', 'Readcode': 'Eu42.11'}"
+3208,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': 'Obsessive-compulsive disorders', 'Readcode': 'E203.00'}"
+38809,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Other obsessive-compulsive disorders', 'Readcode': 'Eu42y00'}"
+47365,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': 'Anancastic neurosis', 'Readcode': 'E203.11'}"
+5304,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': '[X]Obsessive - compulsive disorder', 'Readcode': 'Eu42.00'}"
+5678,Diagnosis of Obsessive-compulsive disorder,Med codes,C1321,3781,Obsessive-compulsive disorder - Primary care,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'ReadcodeDescr': 'Compulsive neurosis', 'Readcode': 'E203000'}"
+F42,Obsessive-compulsive disorder,ICD10 codes,C1322,3783,Obsessive-compulsive disorder - Secondary care - Diagnoses,PH223,446,Obsessive-compulsive disorder,"{'Disease': 'Obsessive-compulsive disorder', 'Category': 'Diagnosis of Obsessive-compulsive disorder'}"
\ No newline at end of file
diff --git a/example/clinical-codes-org/Palliative care codes/Where this code list comes from .docx b/example/clinical-codes-org/Palliative care codes/Where this code list comes from .docx
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diff --git a/example/clinical-codes-org/Palliative care codes/res176-palliative-and-end-of-life-care.csv b/example/clinical-codes-org/Palliative care codes/res176-palliative-and-end-of-life-care.csv
new file mode 100644
index 0000000..ba9b96e
--- /dev/null
+++ b/example/clinical-codes-org/Palliative care codes/res176-palliative-and-end-of-life-care.csv	
@@ -0,0 +1,55 @@
+code,coding_system,description,entity,list_name,upload_date
+66S3.00,Read,full care by hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+66S4.00,Read,shared care - hospice / gp,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8B2a.00,Read,prescription of palliative care anticipatory medication,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BA2.11,Read,end of life care,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BAe.00,Read,anticipatory palliative care,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BAN.00,Read,community specialist palliative care,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BAP.00,Read,specialist palliative care,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BAQ.00,Read,final days pathway,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BAR.00,Read,specialist palliative care treatment - inpatient,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BAS.00,Read,specialist palliative care treatment - daycare,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BAT.00,Read,specialist palliative care treatment - outpatient,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BJ1.00,Read,palliative treatment,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BMM.00,Read,issue of palliative care anticipatory medication box,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8BMM.11,Read,issue of palliative care just in case box,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8CM1.00,Read,on gold standards palliative care framework,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8CMW300,Read,end of life care pathway,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8H7g.00,Read,referral to palliative care service,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8Hg0.00,Read,discharged from community specialist palliative care team,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8Hga.00,Read,discharge from hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8HgX.00,Read,discharge from palliative care service,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8HH7.00,Read,referred to community specialist palliative care team,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8HX..00,Read,admission to hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8HX0.00,Read,urgent admission to hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8HX1.00,Read,routine admission to hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8HX2.00,Read,admission to hospice for respite,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+8HY..00,Read,referral to hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+949A.00,Read,patient died in hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+949G.00,Read,patient died in hospice community lodge,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9b1B.00,Read,hospice - nhs,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9b1C.00,Read,hospice - independent,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9b74.00,Read,hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9b74000,Read,hospice community lodge,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9b9B.00,Read,palliative medicine,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9c0L000,Read,planned palliative oncology treatment,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9c0P.00,Read,current palliative oncology treatment,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9e02.00,Read,notif to primary care oohs of palliative care plan in place,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9Ng7.00,Read,on end of life care register,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9NgD.00,Read,under care of palliative care service,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9Nh0.00,Read,under the care of community palliative care team,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9NkJ.00,Read,seen in hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9NlJ.00,Read,seen by palliative care service,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9NNd.00,Read,under care of palliative care specialist nurse,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9NNf000,Read,under care of palliative care physician,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+9NNZ.00,Read,has end of life care pathway key worker,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+M270300,Read,hospice acquired pressure ulcer,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+Z172.00,Read,palliative care,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZL18R00,Read,under care of palliative care physician,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZL5AP00,Read,referral to palliative care physician,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZL9AR00,Read,seen by palliative care physician,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZLD3R00,Read,discharge by palliative care physician,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZLE6P00,Read,discharge from palliative care service,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZLF1.00,Read,discharge from hospice,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZLF1100,Read,discharge from hospice day hospital,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
+ZV57C00,Read,[v]palliative care,diagnostic,883 - res176: Palliative and end of life care,18/02/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Peptic ulcer/Where this code list comes from .docx b/example/clinical-codes-org/Peptic ulcer/Where this code list comes from .docx
new file mode 100644
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z2Z5gJ*Sv$@v)X?7^=|(|epow%kx7?91jlg}P=CUyXw1Vc0=!WTK;3)~*U7-ZFqxTw
z0n(@iCn9u>sJoJpHEw2Ofb2Gf=tkaiiq$0aovH}4UUEQ9LN){4A?Ul}5Zd?fK(&K+
z$06;JLpK6_PXWS+gThcFkarlMYe!pnjL^++TbzLbV;M5KcJ#%d2>oqRP}@<KhNA07
zUo42wzf1<IA8qL%x(VoO;1DJV%0W#)tcXL`ydP!K455{QK~@XN_s}Ucbls>k8OXYi
z=`diM*FZM_b%X-h0DV(*0}$gC=%%3d>5)xwHbXZB+_FbE0JX1-Y=DkAx&dHkU^NA`
zdx>m{y#=x<ker3u*+h2{Y9|HRELSV+W`UiAHH)IQbdk;Su|YNq<RWmrgYFpA1|hNm
zX}0JFfP)9CDX8ryWK(MGkdhjrHHGdB)Or)yfMX8G&On4O*d5R?VPym95M>Z$sAgqg
JIO_!B0RV7tl)L}{

literal 0
HcmV?d00001

diff --git a/example/clinical-codes-org/Peptic ulcer/phenotype_PH1091_ver_2385_concepts_20230719T122902.csv b/example/clinical-codes-org/Peptic ulcer/phenotype_PH1091_ver_2385_concepts_20230719T122902.csv
new file mode 100644
index 0000000..9b1ed3f
--- /dev/null
+++ b/example/clinical-codes-org/Peptic ulcer/phenotype_PH1091_ver_2385_concepts_20230719T122902.csv	
@@ -0,0 +1,104 @@
+code,description,coding_system,concept_id,concept_version_id,concept_name,phenotype_id,phenotype_version_id,phenotype_name,Medcode
+14C1.00,H/O: peptic ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,2812
+14C1.11,H/O: duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,6321
+14C1.12,H/O: gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,7108
+7612111,Balfour excision of gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,92695
+7612500,Resection of gastric ulcer by cautery,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,64710
+761J.00,Operations on gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,23688
+761J.11,Stomach ulcer operations,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,6865
+761J000,Closure of perforated gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,20677
+761J100,Closure of gastric ulcer NEC,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,64014
+761J111,Suture of ulcer of stomach NEC,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,70005
+761Jy00,Other specified operation on gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,94104
+761Jz00,Operation on gastric ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,33914
+7627,Operations on duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,5928
+7627000,Closure of perforated duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,4741
+7627100,Suture of duodenal ulcer not elsewhere classified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,37268
+7627y00,Other specified operation on duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,56005
+7627z00,Operation on duodenal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,55933
+J102000,Peptic ulcer of oesophagus,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,24021
+J11..00,Gastric ulcer - (GU),Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,1262
+J11..11,Prepyloric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,6333
+J11..12,Pyloric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,3101
+J110.00,Acute gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,24040
+J110000,Acute gastric ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,64165
+J110200,Acute gastric ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,14671
+J110400,Acute gastric ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,109546
+J110y00,Acute gastric ulcer unspecified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,24342
+J110z00,Acute gastric ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,44324
+J111.00,Chronic gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,18654
+J111000,Chronic gastric ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,48946
+J111200,Chronic gastric ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,53336
+J111211,Perforated chronic gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,11104
+J111400,Chronic gastric ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,67356
+J111y00,Chronic gastric ulcer unspecified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,64556
+J111z00,Chronic gastric ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,44309
+J112.00,Anti-platelet induced gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,63001
+J112z00,Anti-platelet induced gastric ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,89227
+J113.00,Non steroidal anti inflammatory drug induced gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,89023
+J11y.00,Unspecified gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,53081
+J11y000,Unspecified gastric ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,73338
+J11y200,Unspecified gastric ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,36461
+J11y400,Unspecified gastric ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,73697
+J11yz00,Unspecified gastric ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,44284
+J11z.00,Gastric ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,29771
+J11z.12,Multiple gastric ulcers,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,52323
+J12..00,Duodenal ulcer - (DU),Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,352
+J120.00,Acute duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,18027
+J120000,Acute duodenal ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,44335
+J120200,Acute duodenal ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,18324
+J120400,Acute duodenal ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,73417
+J120y00,Acute duodenal ulcer unspecified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,53822
+J120z00,Acute duodenal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,53797
+J121.00,Chronic duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,9853
+J121000,Chronic duodenal ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,33438
+J121200,Chronic duodenal ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,37643
+J121211,Perforated chronic duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,23087
+J121400,Chronic duodenal ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,44073
+J121y00,Chronic duodenal ulcer unspecified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,52138
+J121z00,Chronic duodenal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,51406
+J122.00,Duodenal ulcer disease,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,22918
+J123.00,Duodenal erosion,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,3462
+J124.00,Recurrent duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,29317
+J125.00,Anti-platelet induced duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,89234
+J126.00,Non steroidal anti inflammatory drug induced duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,85989
+J12y.00,Unspecified duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,53669
+J12y000,Unspecified duodenal ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,71150
+J12y200,Unspecified duodenal ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,657
+J12y400,Unspecified duodenal ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,71904
+J12yz00,Unspecified duodenal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,65737
+J12z.00,Duodenal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,15175
+J13..00,Peptic ulcer - (PU) site unspecified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,670
+J13..11,Stress ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,15821
+J130.00,Acute peptic ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,32856
+J130000,Acute peptic ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,68661
+J130200,Acute peptic ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,5521
+J130y00,Acute peptic ulcer unspecified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,67711
+J130z00,Acute peptic ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,50048
+J131.00,Chronic peptic ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,40997
+J131000,Chronic peptic ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,99430
+J131200,Chronic peptic ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,37620
+J131400,Chronic peptic ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,52313
+J131y00,Chronic peptic ulcer unspecified,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,70390
+J131z00,Chronic peptic ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,69663
+J13y.00,Unspecified peptic ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,50497
+J13y000,Unspecified peptic ulcer without mention of complication,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,67082
+J13y200,Unspecified peptic ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,64111
+J13y400,Unspecified peptic ulcer with obstruction,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,99670
+J13yz00,Unspecified peptic ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,60249
+J13z.00,Peptic ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,19928
+J14..00,Gastrojejunal ulcer (GJU),Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,23082
+J14..12,Gastrocolic ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,64913
+J14..13,Jejunal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,9981
+J140.00,Acute gastrojejunal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,45184
+J140200,Acute gastrojejunal ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,102177
+J140z00,Acute gastrojejunal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,42274
+J141.00,Chronic gastrojejunal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,96090
+J14y.00,Unspecified gastrojejunal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,63482
+J14y200,Unspecified gastrojejunal ulcer with perforation,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,15979
+J14yz00,Unspecified gastrojejunal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,66092
+J14z.00,Gastrojejunal ulcer NOS,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,15403
+J17y800,Healed gastric ulcer leaving a scar,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,18319
+ZV12711,[V]Personal history of peptic ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,26261
+ZV12712,[V]Personal history of duodenal ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,40489
+ZV12C00,[V] Personal history of gastric ulcer,Read codes v2,C3359,10255,Peptic ulcer disease Read codes - Elixhauser,PH1091,2385,Peptic ulcer disease - Elixhauser primary care,41271
\ No newline at end of file
diff --git a/example/clinical-codes-org/Personality disorders/Where this code list comes from .docx b/example/clinical-codes-org/Personality disorders/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..e577b9a9545dba087b0402d039016e1cbc13e1dc
GIT binary patch
literal 18506
zcmWIWW@Zs#U}NB5U|>*Wh<Dj{X)YrJgC;uzgD}HU#%SmKypq(slK7Cyg4E(zy^7o%
zg+&J$H5M>1F^qzt8v=W#M*BZD5NN$0{>a{?&b2o>%qipQ7XBEyNR_T5s|(fEw&s8G
zY5Z5MrulW<0`Ub0yq6rAS8R8Fj>_SWlQ$n_Rxvpko)qxSl`*dU){jipJT>vX!hs5!
z@!HZhAxVrH#}+roA3mwXBo^~_qmc2UAMRdPj0?C<3mp9HB|Itk$o5RF#h1QkaeZ2G
z-+r1^1(UyRmg$j<3bx)^(OT!`|M)mbrO`ETj-L6pxTyh#QHw<lSJr&^sy+Q)xAV!V
zcje~H>}c;%d=k}Omb&?%_ucqBUn5hIaIK3=i+U90omZvGe!25e^3+?SYzybh61+S2
zg?4LZI6RqW9sNvnc~AVu{3i<UEKa<$x-om{<eQnD4o6n(*nW5R;`LLuD;89*3+gzb
z==GtnCDiNIE4lBsPD;#{>e9dO6bPxmI#+k7==y=pU$!NeFRX6a{W?GUU;QI%#|dI$
z`;-~xzBBu6Q}<7*rsmgrH^#T$m$m(x>v*Af$%DMPQ`-)dYTo%j_w=H*_ud&id;4Fa
z@7p_PvA-sV-_K7wVHvThe&XL*3MbyVn^&<hF#P||%z&CDXNK0XvM@3*JY-^E;AZ&D
z7+;i{Q>?ECA{7?BAI*wGHxrWM@->srdmVNVIQG8j{f0ApXKv~0FnQ_Pa?j-vGtchJ
zDl`5beiw3kd%120Th^uK<8yyLn|;6LO;z!R=Bnp2s@`iwh^cCn-I{%GtLPpx|L*Dl
z&l8eTdmeN3%}EH3k6#;Kp>Wc9<!k4ln@5*&Sxx-VFr(!7w4jH~yYJlmnc?}#c$<XB
z{=m~av`$<1?6+MYSGj8KN`<_$yepnbe0o-yzyJ2vS@L`DMVA$&v3_#AA!*hvU>rTg
zE`G68m##PKvDeRI{5%vzB&9#tTzpluX#aZG(@t$I0l!aNwu$f3T=4X%!)L)>QTvxQ
zKQav5OHP$_J^N;#`NghtyYa_4Ciguoe$Du*&VVg{lr0Tjqr}L-aGQmJL5ATLLwSBt
ziasQhq~s@;=BDPAfT}HMhPlR|v4DY*oRA;fde%%iopsni!1a6UzvhekroG*gsX1}8
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diff --git a/example/clinical-codes-org/Personality disorders/res38-personality-disorder.csv b/example/clinical-codes-org/Personality disorders/res38-personality-disorder.csv
new file mode 100644
index 0000000..9a7ef84
--- /dev/null
+++ b/example/clinical-codes-org/Personality disorders/res38-personality-disorder.csv	
@@ -0,0 +1,79 @@
+code,coding_system,description,entity,list_name,upload_date
+E21..00,Read,Personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+E210.00,Read,Paranoid personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E211.00,Read,Affective personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E211000,Read,Unspecified affective personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21..11,Read,Neurotic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E211100,Read,Hypomanic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E211200,Read,Depressive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E211300,Read,Cyclothymic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E211z00,Read,Affective personality disorder NOS,diagnostic,381 - res38: Personality disorder,20/01/2016
+E212.00,Read,Schizoid personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E212000,Read,Unspecified schizoid personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E212z00,Read,Schizoid personality disorder NOS,diagnostic,381 - res38: Personality disorder,20/01/2016
+E213.00,Read,Explosive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E214.00,Read,Compulsive personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+E214000,Read,Anankastic personality,diagnostic,381 - res38: Personality disorder,20/01/2016
+E214.11,Read,Anancastic personality,diagnostic,381 - res38: Personality disorder,20/01/2016
+E214z00,Read,Compulsive personality disorder NOS,diagnostic,381 - res38: Personality disorder,20/01/2016
+E215.00,Read,Histrionic personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+E215000,Read,Unspecified histrionic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E215.11,Read,Hysterical personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+E215z00,Read,Histrionic personality disorder NOS,diagnostic,381 - res38: Personality disorder,20/01/2016
+E216.00,Read,Inadequate personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E217.00,Read,Antisocial or sociopathic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y.00,Read,Other personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y000,Read,Narcissistic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y100,Read,Avoidant personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y200,Read,Borderline personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y300,Read,Passive-aggressive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y400,Read,Eccentric personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y500,Read,Immature personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y600,Read,Masochistic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21y700,Read,Psychoneurotic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21yz00,Read,Other personality disorder NOS,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21z.00,Read,Personality disorder NOS,diagnostic,381 - res38: Personality disorder,20/01/2016
+E21z.11,Read,Psychopathic personality,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu06000,Read,[X]Organic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu06011,Read,[X]Organic pseudopsychopathic personality,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu21.17,Read,[X]Pseudopsychopathic schizophrenia,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu21.18,Read,[X]Schizotypal personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu34011,Read,[X]Affective personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu34112,Read,[X]Depressive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60.00,Read,[X]Specific personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60000,Read,[X]Paranoid personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60013,Read,[X]Querulant personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60014,Read,[X]Sensitive paranoid personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60100,Read,[X]Schizoid personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60200,Read,[X]Dissocial personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60212,Read,[X]Antisocial personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60213,Read,[X]Asocial personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60214,Read,[X]Psychopathic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60215,Read,[X]Sociopathic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60300,Read,[X]Emotionally unstable personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60311,Read,[X]Aggressive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60312,Read,[X]Borderline personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60313,Read,[X]Explosive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60400,Read,[X]Histrionic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60411,Read,[X]Hysterical personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60412,Read,[X]Psychoinfantile personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60500,Read,[X]Anankastic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60511,Read,[X]Compulsive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60512,Read,[X]Obsessional personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60513,Read,[X]Obsessive-compulsive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60600,Read,[X]Anxious [avoidant] personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60700,Read,[X]Dependent personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60711,Read,[X]Asthenic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60712,Read,[X]Inadequate personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60713,Read,[X]Passive personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60714,Read,[X]Self defeating personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60y00,Read,[X]Other specific personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60y11,Read,[X]Eccentric personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60y12,Read,[X]Haltlose type personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60y13,Read,[X]Immature personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60y14,Read,[X]Narcissistic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60y16,Read,[X]Psychoneurotic personality disorder,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu60z00,Read,[X]Personality disorder; unspecified,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu61.00,Read,[X]Mixed and other personality disorders,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu84511,Read,[X]Autistic psychopathy,diagnostic,381 - res38: Personality disorder,20/01/2016
+Eu94211,Read,[X]Affectionless psychopathy,diagnostic,381 - res38: Personality disorder,20/01/2016
\ No newline at end of file
diff --git a/example/clinical-codes-org/Self harm/Where this code list comes from .docx b/example/clinical-codes-org/Self harm/Where this code list comes from .docx
new file mode 100644
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diff --git a/example/clinical-codes-org/Self harm/res41-self-harm.csv b/example/clinical-codes-org/Self harm/res41-self-harm.csv
new file mode 100644
index 0000000..8a22c64
--- /dev/null
+++ b/example/clinical-codes-org/Self harm/res41-self-harm.csv	
@@ -0,0 +1,262 @@
+code,coding_system,description,entity,list_name,upload_date
+14K1.00,Read,Intentional overdose of prescription only medication,diagnostic,393 - res41: Self-harm,15/02/2016
+SL...14,Read,Overdose of biological substance,diagnostic,393 - res41: Self-harm,15/02/2016
+SL...15,Read,Overdose of drug,diagnostic,393 - res41: Self-harm,15/02/2016
+SL90.00,Read,Antidepressant poisoning,diagnostic,393 - res41: Self-harm,15/02/2016
+SL90z00,Read,Anti-depressant poisoning NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+SLHz.00,Read,Drug and medicament poisoning NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK...00,Read,Suicide and selfinflicted injury,diagnostic,393 - res41: Self-harm,15/02/2016
+TK0..00,Read,Suicide + selfinflicted poisoning by solid/liquid substances,diagnostic,393 - res41: Self-harm,15/02/2016
+TK00.00,Read,Suicide + selfinflicted poisoning by analgesic/antipyretic,diagnostic,393 - res41: Self-harm,15/02/2016
+TK01.00,Read,Suicide + selfinflicted poisoning by barbiturates,diagnostic,393 - res41: Self-harm,15/02/2016
+TK01000,Read,Suicide and self inflicted injury by Amylobarbitone,diagnostic,393 - res41: Self-harm,15/02/2016
+TK01100,Read,Suicide and self inflicted injury by Barbitone,diagnostic,393 - res41: Self-harm,15/02/2016
+TK01400,Read,Suicide and self inflicted injury by Phenobarbitone,diagnostic,393 - res41: Self-harm,15/02/2016
+TK02.00,Read,Suicide + selfinflicted poisoning by oth sedatives/hypnotics,diagnostic,393 - res41: Self-harm,15/02/2016
+TK03.00,Read,Suicide + selfinflicted poisoning tranquilliser/psychotropic,diagnostic,393 - res41: Self-harm,15/02/2016
+TK04.00,Read,Suicide + selfinflicted poisoning by other drugs/medicines,diagnostic,393 - res41: Self-harm,15/02/2016
+TK05.00,Read,Suicide + selfinflicted poisoning by drug or medicine NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK06.00,Read,Suicide + selfinflicted poisoning by agricultural chemical,diagnostic,393 - res41: Self-harm,15/02/2016
+TK07.00,Read,Suicide + selfinflicted poisoning by corrosive/caustic subst,diagnostic,393 - res41: Self-harm,15/02/2016
+TK0z.00,Read,Suicide + selfinflicted poisoning by solid/liquid subst NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK1..00,Read,Suicide + selfinflicted poisoning by gases in domestic use,diagnostic,393 - res41: Self-harm,15/02/2016
+TK10.00,Read,Suicide + selfinflicted poisoning by gas via pipeline,diagnostic,393 - res41: Self-harm,15/02/2016
+TK...11,Read,Cause of overdose - deliberate,diagnostic,393 - res41: Self-harm,15/02/2016
+TK11.00,Read,Suicide + selfinflicted poisoning by liquified petrol gas,diagnostic,393 - res41: Self-harm,15/02/2016
+TK...12,Read,Injury - self-inflicted,diagnostic,393 - res41: Self-harm,15/02/2016
+TK...13,Read,Poisoning - self-inflicted,diagnostic,393 - res41: Self-harm,15/02/2016
+TK...14,Read,Suicide and self harm,diagnostic,393 - res41: Self-harm,15/02/2016
+TK...15,Read,Attempted suicide,diagnostic,393 - res41: Self-harm,15/02/2016
+TK...17,Read,Para-suicide,diagnostic,393 - res41: Self-harm,15/02/2016
+TK1y.00,Read,Suicide and selfinflicted poisoning by other utility gas,diagnostic,393 - res41: Self-harm,15/02/2016
+TK1z.00,Read,Suicide + selfinflicted poisoning by domestic gases NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK2..00,Read,Suicide + selfinflicted poisoning by other gases and vapours,diagnostic,393 - res41: Self-harm,15/02/2016
+TK20.00,Read,Suicide + selfinflicted poisoning by motor veh exhaust gas,diagnostic,393 - res41: Self-harm,15/02/2016
+TK21.00,Read,Suicide and selfinflicted poisoning by other carbon monoxide,diagnostic,393 - res41: Self-harm,15/02/2016
+TK2z.00,Read,Suicide + selfinflicted poisoning by gases and vapours NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK3..00,Read,Suicide + selfinflicted injury by hang/strangulate/suffocate,diagnostic,393 - res41: Self-harm,15/02/2016
+TK30.00,Read,Suicide and selfinflicted injury by hanging,diagnostic,393 - res41: Self-harm,15/02/2016
+TK31.00,Read,Suicide + selfinflicted injury by suffocation by plastic bag,diagnostic,393 - res41: Self-harm,15/02/2016
+TK3y.00,Read,Suicide + selfinflicted inj oth mean hang/strangle/suffocate,diagnostic,393 - res41: Self-harm,15/02/2016
+TK3z.00,Read,Suicide + selfinflicted inj by hang/strangle/suffocate NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK4..00,Read,Suicide and selfinflicted injury by drowning,diagnostic,393 - res41: Self-harm,15/02/2016
+TK5..00,Read,Suicide and selfinflicted injury by firearms and explosives,diagnostic,393 - res41: Self-harm,15/02/2016
+TK51.00,Read,Suicide and selfinflicted injury by shotgun,diagnostic,393 - res41: Self-harm,15/02/2016
+TK52.00,Read,Suicide and selfinflicted injury by hunting rifle,diagnostic,393 - res41: Self-harm,15/02/2016
+TK54.00,Read,Suicide and selfinflicted injury by other firearm,diagnostic,393 - res41: Self-harm,15/02/2016
+TK5z.00,Read,Suicide and selfinflicted injury by firearms/explosives NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK6..00,Read,Suicide and selfinflicted injury by cutting and stabbing,diagnostic,393 - res41: Self-harm,15/02/2016
+TK60.00,Read,Suicide and selfinflicted injury by cutting,diagnostic,393 - res41: Self-harm,15/02/2016
+TK60100,Read,Self inflicted lacerations to wrist,diagnostic,393 - res41: Self-harm,15/02/2016
+TK60111,Read,Slashed wrists self inflicted,diagnostic,393 - res41: Self-harm,15/02/2016
+TK61.00,Read,Suicide and selfinflicted injury by stabbing,diagnostic,393 - res41: Self-harm,15/02/2016
+TK6z.00,Read,Suicide and selfinflicted injury by cutting and stabbing NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TK7..00,Read,Suicide and selfinflicted injury by jumping from high place,diagnostic,393 - res41: Self-harm,15/02/2016
+TK70.00,Read,Suicide+selfinflicted injury-jump from residential premises,diagnostic,393 - res41: Self-harm,15/02/2016
+TK71.00,Read,Suicide+selfinflicted injury-jump from oth manmade structure,diagnostic,393 - res41: Self-harm,15/02/2016
+TK72.00,Read,Suicide+selfinflicted injury-jump from natural sites,diagnostic,393 - res41: Self-harm,15/02/2016
+TK7z.00,Read,Suicide+selfinflicted injury-jump from high place NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx..00,Read,Suicide and selfinflicted injury by other means,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx0.00,Read,Suicide + selfinflicted injury-jump/lie before moving object,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx0000,Read,Suicide + selfinflicted injury-jumping before moving object,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx1.00,Read,Suicide and selfinflicted injury by burns or fire,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx2.00,Read,Suicide and selfinflicted injury by scald,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx3.00,Read,Suicide and selfinflicted injury by extremes of cold,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx4.00,Read,Suicide and selfinflicted injury by electrocution,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx5.00,Read,Suicide and selfinflicted injury by crashing motor vehicle,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx6.00,Read,Suicide and selfinflicted injury by crashing of aircraft,diagnostic,393 - res41: Self-harm,15/02/2016
+TKx7.00,Read,Suicide and selfinflicted injury caustic subst; excl poison,diagnostic,393 - res41: Self-harm,15/02/2016
+TKxy.00,Read,Suicide and selfinflicted injury by other specified means,diagnostic,393 - res41: Self-harm,15/02/2016
+TKxz.00,Read,Suicide and selfinflicted injury by other means NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+TKy..00,Read,Late effects of selfinflicted injury,diagnostic,393 - res41: Self-harm,15/02/2016
+TKz..00,Read,Suicide and selfinflicted injury NOS,diagnostic,393 - res41: Self-harm,15/02/2016
+U2...00,Read,[X]Intentional self-harm,diagnostic,393 - res41: Self-harm,15/02/2016
+U20..00,Read,[X]Intentional self poisoning/exposure to noxious substances,diagnostic,393 - res41: Self-harm,15/02/2016
+U200.00,Read,[X]Intent self poison/exposure to nonopioid analgesic,diagnostic,393 - res41: Self-harm,15/02/2016
+U200000,Read,[X]Int self poison/exposure to nonopioid analgesic at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U200100,Read,[X]Intent self poison nonopioid analgesic at res institut,diagnostic,393 - res41: Self-harm,15/02/2016
+U200.11,Read,[X]Overdose - paracetamol,diagnostic,393 - res41: Self-harm,15/02/2016
+U200.12,Read,[X]Overdose - ibuprofen,diagnostic,393 - res41: Self-harm,15/02/2016
+U200.13,Read,[X]Overdose - aspirin,diagnostic,393 - res41: Self-harm,15/02/2016
+U200400,Read,[X]Intent self pois nonopioid analgesic in street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U200500,Read,[X]Intent self pois nonopioid analgesic trade/service area,diagnostic,393 - res41: Self-harm,15/02/2016
+U200y00,Read,[X]Int self poison nonopioid analgesic other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U200z00,Read,[X]Intent self poison nonopioid analgesic unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U201.00,Read,[X]Intent self poison/exposure to antiepileptic,diagnostic,393 - res41: Self-harm,15/02/2016
+U201000,Read,[X]Int self poison/exposure to antiepileptic at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U20..11,Read,[X]Deliberate drug overdose / other poisoning,diagnostic,393 - res41: Self-harm,15/02/2016
+U201z00,Read,[X]Intent self poison antiepileptic unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.00,Read,[X]Intent self poison/exposure to sedative hypnotic,diagnostic,393 - res41: Self-harm,15/02/2016
+U202000,Read,[X]Int self poison/exposure to sedative hypnotic at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.11,Read,[X]Overdose - sleeping tabs,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.12,Read,[X]Overdose - diazepam,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.13,Read,[X]Overdose - temazepam,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.15,Read,[X]Overdose - nitrazepam,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.16,Read,[X]Overdose - benzodiazepine,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.17,Read,[X]Overdose - barbiturate,diagnostic,393 - res41: Self-harm,15/02/2016
+U202.18,Read,[X]Overdose - amobarbital,diagnostic,393 - res41: Self-harm,15/02/2016
+U202400,Read,[X]Intent self pois sedative hypnotic in street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U202y00,Read,[X]Int self poison sedative hypnotic other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U202z00,Read,[X]Intent self poison sedative hypnotic unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U204.00,Read,[X]Intent self poison/exposure to psychotropic drug,diagnostic,393 - res41: Self-harm,15/02/2016
+U204000,Read,[X]Int self poison/exposure to psychotropic drug at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U204100,Read,[X]Intent self poison psychotropic drug at res institut,diagnostic,393 - res41: Self-harm,15/02/2016
+U204.11,Read,[X]Overdose - antidepressant,diagnostic,393 - res41: Self-harm,15/02/2016
+U204.12,Read,[X]Overdose - amitriptyline,diagnostic,393 - res41: Self-harm,15/02/2016
+U204.13,Read,[X]Overdose - SSRI,diagnostic,393 - res41: Self-harm,15/02/2016
+U204y00,Read,[X]Int self poison psychotropic drug other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U204z00,Read,[X]Intent self poison psychotropic drug unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U205.00,Read,[X]Intent self poison/exposure to narcotic drug,diagnostic,393 - res41: Self-harm,15/02/2016
+U205000,Read,[X]Int self poison/exposure to narcotic drug at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U205y00,Read,[X]Int self poison narcotic drug other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U205z00,Read,[X]Intent self poison narcotic drug unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U206.00,Read,[X]Intent self poison/exposure to hallucinogen,diagnostic,393 - res41: Self-harm,15/02/2016
+U206400,Read,[X]Intent self pois hallucinogen in street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U207.00,Read,[X]Intent self poison/exposure to oth autonomic drug,diagnostic,393 - res41: Self-harm,15/02/2016
+U207000,Read,[X]Int self poison/exposure to oth autonomic drug at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U207z00,Read,[X]Intent self poison oth autonomic drug unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U208.00,Read,[X]Int self poison/exposure to other/unspec drug/medicament,diagnostic,393 - res41: Self-harm,15/02/2016
+U208000,Read,[X]Int self poison/exposure to oth/unsp drug/medicam home,diagnostic,393 - res41: Self-harm,15/02/2016
+U208400,Read,[X]Intent self pois oth/unsp drug/medic in street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U208y00,Read,[X]Int self poison oth/unsp drug/medic other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U208z00,Read,[X]Intent self poison oth/unsp drug/medic unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U209.00,Read,[X]Intent self poison/exposure to alcohol,diagnostic,393 - res41: Self-harm,15/02/2016
+U209y00,Read,[X]Int self poison alcohol other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U209z00,Read,[X]Intent self poison alcohol unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U20A.00,Read,[X]Intentional self poison organ solvent;halogen hydrocarb,diagnostic,393 - res41: Self-harm,15/02/2016
+U20A000,Read,[X]Intent self pois organ solvent;halogen hydrocarb; home,diagnostic,393 - res41: Self-harm,15/02/2016
+U20A.11,Read,[X]Self poisoning from glue solvent,diagnostic,393 - res41: Self-harm,15/02/2016
+U20A400,Read,[X]Int self poison org solvent;halogen hydrocarb;in highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U20Az00,Read,[X]Int self pois org solv;halogen hydrocarb; unspec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U20B.00,Read,[X]Intent self poison/exposure to other gas/vapour,diagnostic,393 - res41: Self-harm,15/02/2016
+U20B000,Read,[X]Int self poison/exposure to other gas/vapour at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U20B.11,Read,[X]Self carbon monoxide poisoning,diagnostic,393 - res41: Self-harm,15/02/2016
+U20B200,Read,[X]Int self poison other gas/vapour school/pub admin area,diagnostic,393 - res41: Self-harm,15/02/2016
+U20By00,Read,[X]Int self poison other gas/vapour other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U20Bz00,Read,[X]Intent self poison other gas/vapour unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U20C.00,Read,[X]Intent self poison/exposure to pesticide,diagnostic,393 - res41: Self-harm,15/02/2016
+U20C000,Read,[X]Int self poison/exposure to pesticide at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U20C.11,Read,[X]Self poisoning with weedkiller,diagnostic,393 - res41: Self-harm,15/02/2016
+U20C.12,Read,[X]Self poisoning with paraquat,diagnostic,393 - res41: Self-harm,15/02/2016
+U20Cy00,Read,[X]Int self poison pesticide other spec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U20y.00,Read,[X]Intent self poison/exposure to unspecif chemical,diagnostic,393 - res41: Self-harm,15/02/2016
+U20y000,Read,[X]Int self poison/exposure to unspecif chemical at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U20y200,Read,[X]Int self poison unspecif chemical school/pub admin area,diagnostic,393 - res41: Self-harm,15/02/2016
+U20yz00,Read,[X]Intent self poison unspecif chemical unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U21..00,Read,[X]Intent self harm by hanging strangulation / suffocation,diagnostic,393 - res41: Self-harm,15/02/2016
+U210.00,Read,[X]Intent self harm by hanging strangulat/suffocat occ home,diagnostic,393 - res41: Self-harm,15/02/2016
+U2...11,Read,[X]Self inflicted injury,diagnostic,393 - res41: Self-harm,15/02/2016
+U211.00,Read,[X]Intent self harm by hangng strangult/suffoct resid instit,diagnostic,393 - res41: Self-harm,15/02/2016
+U2...12,Read,[X]Injury - self-inflicted,diagnostic,393 - res41: Self-harm,15/02/2016
+U212.00,Read,[X]Inten slf harm hang strang/suffc sch oth ins/pub adm area,diagnostic,393 - res41: Self-harm,15/02/2016
+U2...13,Read,[X]Suicide,diagnostic,393 - res41: Self-harm,15/02/2016
+U2...14,Read,[X]Attempted suicide,diagnostic,393 - res41: Self-harm,15/02/2016
+U2...15,Read,[X]Para-suicide,diagnostic,393 - res41: Self-harm,15/02/2016
+U216.00,Read,[X]Intent self harm by hang strangl/suffc indust/constr area,diagnostic,393 - res41: Self-harm,15/02/2016
+U21y.00,Read,[X]Intent self harm by hangng strangul/suffoct oth spec plce,diagnostic,393 - res41: Self-harm,15/02/2016
+U21z.00,Read,[X]Intent self harm by hangng strangul/suffoct unspecif plce,diagnostic,393 - res41: Self-harm,15/02/2016
+U22..00,Read,[X]Intentional self harm by drowning and submersion,diagnostic,393 - res41: Self-harm,15/02/2016
+U220.00,Read,[X]Intent self harm by drowning/submersion occurrn at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U221.00,Read,[X]Intent self harm by drowning/submersn occ resid instit'n,diagnostic,393 - res41: Self-harm,15/02/2016
+U22y.00,Read,[X]Intent self harm by drown/submersn occ oth specif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U22z.00,Read,[X]Intent self harm by drown/submersn occ unspecified place,diagnostic,393 - res41: Self-harm,15/02/2016
+U24..00,Read,[X]Intent self harm by rifle shotgun/larger firearm disch,diagnostic,393 - res41: Self-harm,15/02/2016
+U241.00,Read,[X]Int self harm rifl s'gun/lrg frarm disch occ resid instit,diagnostic,393 - res41: Self-harm,15/02/2016
+U242.00,Read,[X]Int slf hrm rifl s'gun/lrg frarm dis sch/ins/pub adm area,diagnostic,393 - res41: Self-harm,15/02/2016
+U25..00,Read,[X]Intent self harm by other/unspecified firearm discharge,diagnostic,393 - res41: Self-harm,15/02/2016
+U250.00,Read,[X]Intent self harm oth/unspecif firearm disch occ at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U26..00,Read,[X]Intentional self harm by explosive material,diagnostic,393 - res41: Self-harm,15/02/2016
+U27..00,Read,[X]Intentional self harm by smoke; fire and flames,diagnostic,393 - res41: Self-harm,15/02/2016
+U270.00,Read,[X]Intention self harm by smoke fire/flames occurrn at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U274.00,Read,[X]Intent self harm by smoke fire/flame occ street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U27z.00,Read,[X]Intent self harm by smoke fire/flames occ unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U28..00,Read,[X]Intentional self harm by steam hot vapours / hot objects,diagnostic,393 - res41: Self-harm,15/02/2016
+U280.00,Read,[X]Intent self harm by steam hot vapour/hot obj occ at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U28z.00,Read,[X]Intent self harm by steam hot vapour/obj occ unspec place,diagnostic,393 - res41: Self-harm,15/02/2016
+U29..00,Read,[X]Intentional self harm by sharp object,diagnostic,393 - res41: Self-harm,15/02/2016
+U290.00,Read,[X]Intentional self harm by sharp object occurrence at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U291.00,Read,[X]Intent self harm by sharp object occ resident instit'n,diagnostic,393 - res41: Self-harm,15/02/2016
+U294.00,Read,[X]Intention self harm by sharp object occ street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U29y.00,Read,[X]Intention self harm by sharp object occ oth specif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U29z.00,Read,[X]Intentional self harm by sharp object occ unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U2A..00,Read,[X]Intentional self harm by blunt object,diagnostic,393 - res41: Self-harm,15/02/2016
+U2A0.00,Read,[X]Intentional self harm by blunt object occurrence at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U2A1.00,Read,[X]Intent self harm by blunt object occ resident instit'n,diagnostic,393 - res41: Self-harm,15/02/2016
+U2A3.00,Read,[X]Intent self harm by blunt object occ sports/athlet area,diagnostic,393 - res41: Self-harm,15/02/2016
+U2B..00,Read,[X]Intentional self harm by jumping from a high place,diagnostic,393 - res41: Self-harm,15/02/2016
+U2B0.00,Read,[X]Intent self harm by jumping from high place occ at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U2B4.00,Read,[X]Intent self harm by jump from high place occ street/h'way,diagnostic,393 - res41: Self-harm,15/02/2016
+U2B6.00,Read,[X]Int self harm by jump from high place indust/constr area,diagnostic,393 - res41: Self-harm,15/02/2016
+U2By.00,Read,[X]Int self harm by jump from high place occ oth specif plce,diagnostic,393 - res41: Self-harm,15/02/2016
+U2Bz.00,Read,[X]Int self harm by jump from high place occ unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U2C..00,Read,[X]Intent self harm by jumping / lying before moving object,diagnostic,393 - res41: Self-harm,15/02/2016
+U2C1.00,Read,[X]Int self harm jump/lying befr mov obje occ resid instit'n,diagnostic,393 - res41: Self-harm,15/02/2016
+U2C4.00,Read,[X]Int self harm jump/lying befr mov obje occ street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U2Cy.00,Read,[X]Int self harm jump/lying bef mov obje occ oth specif plce,diagnostic,393 - res41: Self-harm,15/02/2016
+U2D..00,Read,[X]Intentional self harm by crashing of motor vehicle,diagnostic,393 - res41: Self-harm,15/02/2016
+U2D0.00,Read,[X]Intent self harm by crash of motor vehicl occurrn at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U2D4.00,Read,[X]Intent self harm by crash motor vehicl occ street/highway,diagnostic,393 - res41: Self-harm,15/02/2016
+U2D6.00,Read,[X]Intent self harm crash motor vehic occ indust/constr area,diagnostic,393 - res41: Self-harm,15/02/2016
+U2E..00,Read,[X]Self mutilation,diagnostic,393 - res41: Self-harm,15/02/2016
+U2y..00,Read,[X]Intentional self harm by other specified means,diagnostic,393 - res41: Self-harm,15/02/2016
+U2y0.00,Read,[X]Intentionl self harm by oth specif means occurrn at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U2y1.00,Read,[X]Intent self harm by oth specif means occ resid instit'n,diagnostic,393 - res41: Self-harm,15/02/2016
+U2yz.00,Read,[X]Intent self harm by oth specif means occ unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U2z..00,Read,[X]Intentional self harm by unspecified means,diagnostic,393 - res41: Self-harm,15/02/2016
+U2z0.00,Read,[X]Intentional self harm by unspecif means occurrn at home,diagnostic,393 - res41: Self-harm,15/02/2016
+U2z2.00,Read,[X]Intent self harm by unspec mean occ sch/ins/pub adm area,diagnostic,393 - res41: Self-harm,15/02/2016
+U2zy.00,Read,[X]Intent self harm by unspecif means occ oth specif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U2zz.00,Read,[X]Intent self harm by unspecif means occ at unspecif place,diagnostic,393 - res41: Self-harm,15/02/2016
+U30..11,Read,[X]Deliberate drug poisoning,diagnostic,393 - res41: Self-harm,15/02/2016
+U41..00,Read,[X]Hanging strangulation + suffocation undetermined intent,diagnostic,393 - res41: Self-harm,15/02/2016
+U44..00,Read,[X]Rifle shotgun+larger firearm discharge undetermin intent,diagnostic,393 - res41: Self-harm,15/02/2016
+U45..00,Read,[X]Other+unspecified firearm discharge undetermined intent,diagnostic,393 - res41: Self-harm,15/02/2016
+U4B..00,Read,[X]Falling jumping/pushed from high place undeterm intent,diagnostic,393 - res41: Self-harm,15/02/2016
+U4Bz.00,Read,[X]Fall jump/push frm high plce undt intnt occ unspecif plce,diagnostic,393 - res41: Self-harm,15/02/2016
+U72..00,Read,[X]Sequel intentn self-harm assault+event of undeterm intent,diagnostic,393 - res41: Self-harm,15/02/2016
+U720.00,Read,[X]Sequelae of intentional self-harm,diagnostic,393 - res41: Self-harm,15/02/2016
+ZRLfC12,Read,HoNOS item 2 - non-accidental self injury,diagnostic,393 - res41: Self-harm,15/02/2016
+ZRn3.00,Read,Suicide intent score subscale - attempt circumstances,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX...00,Read,Self-harm,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1..00,Read,Self-injurious behaviour,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX...11,Read,Self-damage,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX11.00,Read,Biting self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX11.11,Read,Bites self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1..12,Read,SIB - Self-injurious behaviour,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1..13,Read,Deliberate self-harm,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX12.00,Read,Burning self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX13.00,Read,Cutting self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX13100,Read,Cutting own wrists,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX13.11,Read,Cuts self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX15.00,Read,Drowning self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX18.00,Read,Hanging self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX19.00,Read,Hitting self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX19100,Read,Punching self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX19200,Read,Slapping self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1B.00,Read,Jumping from height,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1B100,Read,Jumping from building,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1B200,Read,Jumping from bridge,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1B300,Read,Jumping from cliff,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1C.00,Read,Nipping self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1E.00,Read,Pinching self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1G.00,Read,Scratches self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1H.00,Read,Self-asphyxiation,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1H100,Read,Self-strangulation,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1H200,Read,Self-suffocation,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1I.00,Read,Self-scalding,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1J.00,Read,Self-electrocution,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1K.00,Read,Self-incineration,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1K.11,Read,Setting fire to self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1K.12,Read,Setting self alight,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1L.00,Read,Self-mutilation,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1L100,Read,Self-mutilation of hands,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1L200,Read,Self-mutilation of genitalia,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1L300,Read,Self-mutilation of penis,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1L600,Read,Self-mutilation of ears,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1LD00,Read,[X]Self mutilation,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1M.00,Read,Shooting self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1N.00,Read,Stabbing self,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1Q.00,Read,Throwing self in front of train,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1Q.11,Read,Jumping under train,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1R.00,Read,Throwing self in front of vehicle,diagnostic,393 - res41: Self-harm,15/02/2016
+ZX1S.00,Read,Throwing self onto floor,diagnostic,393 - res41: Self-harm,15/02/2016
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Abdominal pain/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Abdominal pain/Where this code list comes from .docx
new file mode 100644
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diff --git a/example/clinical-codes-org/Symptom code lists/Abdominal pain/res176-abdominal-pain.csv b/example/clinical-codes-org/Symptom code lists/Abdominal pain/res176-abdominal-pain.csv
new file mode 100644
index 0000000..4540179
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Abdominal pain/res176-abdominal-pain.csv	
@@ -0,0 +1,77 @@
+code,coding_system,description,entity,list_name,upload_date
+14CF.00,Read,history of irritable bowel syndrome,diagnostic,877 - res176: Abdominal pain,18/02/2021
+196..00,Read,type of git pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+196..11,Read,abdominal pain type,diagnostic,877 - res176: Abdominal pain,18/02/2021
+196..12,Read,type of git pain - symptom,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1962,Read,colicky abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1963,Read,non-colicky abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1964,Read,shoulder pain from abdomen,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1969,Read,abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1969000,Read,abdominal wall pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+196A.00,Read,hunger pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+196Z.00,Read,type of git pain nos,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197..00,Read,site of git pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1971,Read,central abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197..11,Read,flank pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197..12,Read,iliac fossa pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197..13,Read,site of abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197..14,Read,subcostal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1972,Read,epigastric pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1973,Read,left subcostal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1974,Read,right subcostal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1975,Read,left flank pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1976,Read,right flank pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1977,Read,right iliac fossa pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1978,Read,left iliac fossa pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+1979,Read,suprapubic pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197A.00,Read,generalised abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197A.11,Read,general abdominal pain-symptom,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197B.00,Read,upper abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197C.00,Read,lower abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197D.00,Read,right upper quadrant pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+197Z.00,Read,site of git pain nos,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C..00,Read,o/e - abdo. pain on palpation,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C..11,Read,o/e - epigastric pain on palp.,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C..12,Read,o/e - iliac pain on palpation,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C..13,Read,o/e - lumbar pain on palpation,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C..14,Read,o/e - umbilical pain on palp.,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C2.00,Read,o/e - abd.pain-r.hypochondrium,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C3.00,Read,o/e - abd. pain - epigastrium,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C4.00,Read,o/e - abd.pain-l.hypochondrium,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C5.00,Read,o/e - abd. pain - r.lumbar,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C6.00,Read,o/e - abd. pain - umbilical,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C7.00,Read,o/e - abd. pain - l.lumbar,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C8.00,Read,o/e - abd. pain - r.iliac,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25C9.00,Read,o/e - abd. pain - hypogastrium,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25CA.00,Read,o/e - abd. pain - l.iliac,diagnostic,877 - res176: Abdominal pain,18/02/2021
+25CZ.00,Read,o/e -abd.pain on palpation nos,diagnostic,877 - res176: Abdominal pain,18/02/2021
+J521.00,Read,irritable colon - irritable bowel syndrome,diagnostic,877 - res176: Abdominal pain,18/02/2021
+J521000,Read,irritable bowel syndrome with diarrhoea,diagnostic,877 - res176: Abdominal pain,18/02/2021
+J521100,Read,irritable bowel syndrome characterised by constipation,diagnostic,877 - res176: Abdominal pain,18/02/2021
+J521.11,Read,irritable bowel syndrome,diagnostic,877 - res176: Abdominal pain,18/02/2021
+J521.13,Read,spastic colon,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R073200,Read,[d]gas pain (abdominal),diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090.00,Read,[d]abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090500,Read,[d]epigastric pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090600,Read,[d]umbilical pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090700,Read,[d]hypochondrial pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090800,Read,[d]suprapubic pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090900,Read,[d]pain in right iliac fossa,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090A00,Read,[d]pain in left iliac fossa,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090B00,Read,[d]groin pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090C00,Read,[d]loin pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090E00,Read,[d]recurrent acute abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090G00,Read,[d]pelvic and perineal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090G11,Read,[d] pelvic pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090G12,Read,[d] perineal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090H00,Read,[d]upper abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090J00,Read,[d]right upper quadrant pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090K00,Read,[d]left upper quadrant pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090L00,Read,[d]left lower quadrant pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090M00,Read,[d]right lower quadrant pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090N00,Read,[d]nonspecific abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090P00,Read,[d]functional abdominal pain syndrome,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090y00,Read,[d]other specified abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
+R090z00,Read,[d]abdominal pain nos,diagnostic,877 - res176: Abdominal pain,18/02/2021
+Ryu1000,Read,[x]pain localized to other parts of lower abdomen,diagnostic,877 - res176: Abdominal pain,18/02/2021
+Ryu1100,Read,[x]other and unspecified abdominal pain,diagnostic,877 - res176: Abdominal pain,18/02/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Falls/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Falls/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..7deb0db0a60f349e97f1871274b907c0444f79d7
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HcmV?d00001

diff --git a/example/clinical-codes-org/Symptom code lists/Falls/res178-fall.csv b/example/clinical-codes-org/Symptom code lists/Falls/res178-fall.csv
new file mode 100644
index 0000000..078c717
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Falls/res178-fall.csv	
@@ -0,0 +1,100 @@
+code,coding_system,description,entity,list_name,upload_date
+16D..00,Read,Falls,diagnostic,918 - res178: Fall,14/03/2021
+16D1.00,Read,Recurrent falls,diagnostic,918 - res178: Fall,14/03/2021
+16D5.00,Read,Fall onto outstretched hand,diagnostic,918 - res178: Fall,14/03/2021
+16D6.00,Read,Fall,diagnostic,918 - res178: Fall,14/03/2021
+8BIG.00,Read,Falls caused by medication,diagnostic,918 - res178: Fall,14/03/2021
+R200.12,Read,[D] Geriatric fall,diagnostic,918 - res178: Fall,14/03/2021
+T04..00,Read,Fall in; on; or from train,diagnostic,918 - res178: Fall,14/03/2021
+T337.00,Read,Fall from road vehicle NEC,diagnostic,918 - res178: Fall,14/03/2021
+T43..00,Read,Fall on stairs or ladders in water transport,diagnostic,918 - res178: Fall,14/03/2021
+T534.00,Read,Fall from aircraft,diagnostic,918 - res178: Fall,14/03/2021
+TC...00,Read,Accidental falls,diagnostic,918 - res178: Fall,14/03/2021
+TC0..00,Read,Fall on or from stairs or steps,diagnostic,918 - res178: Fall,14/03/2021
+TC00.00,Read,Fall on or from escalator,diagnostic,918 - res178: Fall,14/03/2021
+TC00000,Read,Fall on escalator,diagnostic,918 - res178: Fall,14/03/2021
+TC01.00,Read,Fall on or from stairs,diagnostic,918 - res178: Fall,14/03/2021
+TC01000,Read,Fall on stairs,diagnostic,918 - res178: Fall,14/03/2021
+TC01100,Read,Fall from stairs,diagnostic,918 - res178: Fall,14/03/2021
+TC01z00,Read,Fall on or from stairs NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC02.00,Read,Fall on or from steps,diagnostic,918 - res178: Fall,14/03/2021
+TC02000,Read,Fall on steps,diagnostic,918 - res178: Fall,14/03/2021
+TC02100,Read,Fall from steps,diagnostic,918 - res178: Fall,14/03/2021
+TC02z00,Read,Fall on or from steps NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC0z.00,Read,Fall on or from stairs or steps NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC1..00,Read,Fall on or from ladders or scaffolding,diagnostic,918 - res178: Fall,14/03/2021
+TC10.00,Read,Fall from ladder,diagnostic,918 - res178: Fall,14/03/2021
+TC...11,Read,Fall - accidental,diagnostic,918 - res178: Fall,14/03/2021
+TC11.00,Read,Fall from scaffolding,diagnostic,918 - res178: Fall,14/03/2021
+TC1z.00,Read,Fall from ladder or scaffolding NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC2..00,Read,Fall from or out of building or other structure,diagnostic,918 - res178: Fall,14/03/2021
+TC20.00,Read,Fall from balcony,diagnostic,918 - res178: Fall,14/03/2021
+TC21.00,Read,Fall from bridge,diagnostic,918 - res178: Fall,14/03/2021
+TC22.00,Read,Fall from building,diagnostic,918 - res178: Fall,14/03/2021
+TC23.00,Read,Fall from flagpole,diagnostic,918 - res178: Fall,14/03/2021
+TC24.00,Read,Fall from tower,diagnostic,918 - res178: Fall,14/03/2021
+TC25.00,Read,Fall from turret,diagnostic,918 - res178: Fall,14/03/2021
+TC26.00,Read,Fall from viaduct,diagnostic,918 - res178: Fall,14/03/2021
+TC27.00,Read,Fall from wall,diagnostic,918 - res178: Fall,14/03/2021
+TC28.00,Read,Fall from window,diagnostic,918 - res178: Fall,14/03/2021
+TC29.00,Read,Fall through roof,diagnostic,918 - res178: Fall,14/03/2021
+TC2z.00,Read,Fall from or out of building or other structure NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC3..00,Read,Fall into hole or other opening in surface,diagnostic,918 - res178: Fall,14/03/2021
+TC31.00,Read,Accidental fall into well,diagnostic,918 - res178: Fall,14/03/2021
+TC32.00,Read,Accidental fall into manhole,diagnostic,918 - res178: Fall,14/03/2021
+TC32000,Read,Accidental fall into manhole; unspecified,diagnostic,918 - res178: Fall,14/03/2021
+TC32100,Read,Accidental fall into storm drain,diagnostic,918 - res178: Fall,14/03/2021
+TC32z00,Read,Accidental fall into manhole NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC3y.00,Read,Fall into other hole or other opening in surface,diagnostic,918 - res178: Fall,14/03/2021
+TC3y000,Read,Fall into cavity; unspecified,diagnostic,918 - res178: Fall,14/03/2021
+TC3y100,Read,Fall into dock,diagnostic,918 - res178: Fall,14/03/2021
+TC3y200,Read,Fall into hole,diagnostic,918 - res178: Fall,14/03/2021
+TC3y300,Read,Fall into pit,diagnostic,918 - res178: Fall,14/03/2021
+TC3y400,Read,Fall into quarry,diagnostic,918 - res178: Fall,14/03/2021
+TC3y600,Read,Fall into tank,diagnostic,918 - res178: Fall,14/03/2021
+TC3yz00,Read,Fall into other hole; unspecified,diagnostic,918 - res178: Fall,14/03/2021
+TC3z.00,Read,Fall into hole NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC4..00,Read,Other fall from one level to another,diagnostic,918 - res178: Fall,14/03/2021
+TC40.00,Read,Fall from playground equipment,diagnostic,918 - res178: Fall,14/03/2021
+TC41.00,Read,Fall from cliff,diagnostic,918 - res178: Fall,14/03/2021
+TC42.00,Read,Fall from chair or bed,diagnostic,918 - res178: Fall,14/03/2021
+TC42000,Read,Fall from chair,diagnostic,918 - res178: Fall,14/03/2021
+TC42100,Read,Fall from bed,diagnostic,918 - res178: Fall,14/03/2021
+TC42z00,Read,Fall from chair or bed NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC4y.00,Read,Other fall from one level to another,diagnostic,918 - res178: Fall,14/03/2021
+TC4y000,Read,Fall from embankment,diagnostic,918 - res178: Fall,14/03/2021
+TC4y100,Read,Fall from haystack,diagnostic,918 - res178: Fall,14/03/2021
+TC4y200,Read,Fall from stationary vehicle,diagnostic,918 - res178: Fall,14/03/2021
+TC4y300,Read,Fall from tree,diagnostic,918 - res178: Fall,14/03/2021
+TC4yz00,Read,Other fall from one level to another NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC4z.00,Read,Fall from one level to another NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC5..00,Read,Fall on same level from slipping; tripping or stumbling,diagnostic,918 - res178: Fall,14/03/2021
+TC50.00,Read,Fall on same level from slipping,diagnostic,918 - res178: Fall,14/03/2021
+TC51.00,Read,Fall on same level from tripping,diagnostic,918 - res178: Fall,14/03/2021
+TC52.00,Read,Fall on same level from stumbling,diagnostic,918 - res178: Fall,14/03/2021
+TC5z.00,Read,Fall on same level from slipping; tripping or stumbling NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC6..00,Read,Fall on same level- collision/push/shove by/with oth person,diagnostic,918 - res178: Fall,14/03/2021
+TC60.00,Read,Fall on same level from sports contact,diagnostic,918 - res178: Fall,14/03/2021
+TC60000,Read,Fall on same level from tackle in sport,diagnostic,918 - res178: Fall,14/03/2021
+TC60y00,Read,Other fall in sport,diagnostic,918 - res178: Fall,14/03/2021
+TC60z00,Read,Fall on same level from sports contact NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC6y.00,Read,Fall on same level from other push/shove/collide oth person,diagnostic,918 - res178: Fall,14/03/2021
+TC6y000,Read,Fall on same level from collision with other person; unspec,diagnostic,918 - res178: Fall,14/03/2021
+TC6y100,Read,Fall on same level from pushing by other person; unspecified,diagnostic,918 - res178: Fall,14/03/2021
+TC6y200,Read,Fall on same level from shoving by other person; unspecified,diagnostic,918 - res178: Fall,14/03/2021
+TC6yz00,Read,Other fall on same level- push/shove/collide-oth person NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC6z.00,Read,Fall on same level- push/shove/collide - other person NOS,diagnostic,918 - res178: Fall,14/03/2021
+TC7..00,Read,Fracture; cause unspecified,diagnostic,918 - res178: Fall,14/03/2021
+TCy..00,Read,Other falls,diagnostic,918 - res178: Fall,14/03/2021
+TCy0.00,Read,Fall from bump against object,diagnostic,918 - res178: Fall,14/03/2021
+TCyz.00,Read,Other accidental fall NOS,diagnostic,918 - res178: Fall,14/03/2021
+TCz..00,Read,Accidental falls NOS,diagnostic,918 - res178: Fall,14/03/2021
+TN7..00,Read,Injury ?accidental; fall from high place,diagnostic,918 - res178: Fall,14/03/2021
+TN70.00,Read,Injury ?accidental; fall from residential premises,diagnostic,918 - res178: Fall,14/03/2021
+TN71.00,Read,Injury ?accidental; fall from other man-made structure,diagnostic,918 - res178: Fall,14/03/2021
+TN72.00,Read,Injury ?accidental; fall from natural site,diagnostic,918 - res178: Fall,14/03/2021
+TN7z.00,Read,Injury ?accidental; fall from high place NOS,diagnostic,918 - res178: Fall,14/03/2021
+U10..00,Read,[X]Falls,diagnostic,918 - res178: Fall,14/03/2021
+U10A.00,Read,[X]Fall on and from stairs and steps,diagnostic,918 - res178: Fall,14/03/2021
+U10J.00,Read,[X]Other fall on same level,diagnostic,918 - res178: Fall,14/03/2021
+U10z.00,Read,[X]Unspecified fall,diagnostic,918 - res178: Fall,14/03/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Falls/res202-falls-outcome.csv b/example/clinical-codes-org/Symptom code lists/Falls/res202-falls-outcome.csv
new file mode 100644
index 0000000..4a308cd
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Falls/res202-falls-outcome.csv	
@@ -0,0 +1,666 @@
+code,coding_system,description,entity,list_name,upload_date,type
+W00,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W00.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W01.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W02.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W03.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W04.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W05.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W06.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W07.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W08.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W09.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W10.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W11.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W12.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W13.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W14.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W15.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W16.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W17.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W18.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.0,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.1,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.2,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.3,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.4,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.5,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.6,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.7,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.8,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
+W19.9,ICD-10,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,ICD
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+1.12E+15,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
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+2.92E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
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+73098,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+73119,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+73257,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+7.76E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+7.76E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+7.76E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+7.76E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+7.76E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+7876,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+7948,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+7970,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+85212,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+85216,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+85959,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+8730,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+9.01E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+9.01E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+9.01E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+9.01E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+9.01E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+9.01E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+9.16E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+92721,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+93148,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+93939,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+9.40E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+9.40E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+94933,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+94979,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+96546,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+96577,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+97327,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+97335,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+97365,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+98223,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+98315,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+98713,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+98876,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+9.91E+14,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,Aurum
+99384,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+99385,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+99564,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
+99835,CPRD_product_code,Fall,diagnostic,1102 - res202: Falls outcome,01/03/2023,GOLD
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Fatigue/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Fatigue/Where this code list comes from .docx
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diff --git a/example/clinical-codes-org/Symptom code lists/Fatigue/res175-fatigue.csv b/example/clinical-codes-org/Symptom code lists/Fatigue/res175-fatigue.csv
new file mode 100644
index 0000000..5e277cb
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Fatigue/res175-fatigue.csv	
@@ -0,0 +1,48 @@
+code,coding_system,description,entity,list_name,upload_date
+1682,Read,Fatigue,symptom,957 - res175: fatigue,17/03/2021
+1683,Read,Tired all the time (& [C/O -])                                                                      ,symptom,957 - res175: fatigue,17/03/2021
+1686,Read,Heavy legs                                                                                          ,symptom,957 - res175: fatigue,17/03/2021
+1687,Read,Heavy feeling              ,symptom,957 - res175: fatigue,17/03/2021
+168Z.,Read,Tiredness symptom NOS                                                                               ,symptom,957 - res175: fatigue,17/03/2021
+L168.,Read,Fatigue during pregnancy                                                                            ,diagnostic,957 - res175: fatigue,17/03/2021
+L1680,Read,Fatigue during pregnancy unspecified                                                                ,diagnostic,957 - res175: fatigue,17/03/2021
+L1681,Read,Fatigue during pregnancy - delivered                                                                ,diagnostic,957 - res175: fatigue,17/03/2021
+L1682,Read,Fatigue during pregnancy - delivered with postnatal complication                                    ,diagnostic,957 - res175: fatigue,17/03/2021
+L1683,Read,Fatigue during pregnancy - not delivered                                                            ,diagnostic,957 - res175: fatigue,17/03/2021
+L1684,Read,Fatigue during pregnancy with postnatal complication                                                ,diagnostic,957 - res175: fatigue,17/03/2021
+L168z,Read,Fatigue during pregnancy NOS                     ,diagnostic,957 - res175: fatigue,17/03/2021
+R007.,Read,[D]Malaise and fatigue                                                                              ,symptom,957 - res175: fatigue,17/03/2021
+R0070,Read,[D]Malaise                                                                                          ,symptom,957 - res175: fatigue,17/03/2021
+R0071,Read,[D]Fatigue                                                                                          ,symptom,957 - res175: fatigue,17/03/2021
+R0072,Read,[D]Asthenia NOS                                                                                     ,symptom,957 - res175: fatigue,17/03/2021
+R0073,Read,[D]Lethargy                                                                                         ,symptom,957 - res175: fatigue,17/03/2021
+R0074,Read,[D]Postviral (asthenic) syndrome                                                                    ,symptom,957 - res175: fatigue,17/03/2021
+R0075,Read,[D]Tiredness,symptom,957 - res175: fatigue,17/03/2021
+R007z,Read,[D]Malaise and fatigue NOS,symptom,957 - res175: fatigue,17/03/2021
+Ua150,Read,Tired                                                                                               ,symptom,957 - res175: fatigue,17/03/2021
+X761D,Read,Tedium vitae,symptom,957 - res175: fatigue,17/03/2021
+X76Ac,Read,Tires quickly         ,symptom,957 - res175: fatigue,17/03/2021
+X76Ad,Read,Tired on least exertion                                                                             ,symptom,957 - res175: fatigue,17/03/2021
+X76Ae,Read,Exhaustion                                                                                          ,symptom,957 - res175: fatigue,17/03/2021
+X76Af,Read,Quickly exhausted                                                                                   ,symptom,957 - res175: fatigue,17/03/2021
+X76Ag,Read,Exhausted on least exertion                                                                         ,symptom,957 - res175: fatigue,17/03/2021
+X76qY,Read,Muscle fatigue,symptom,957 - res175: fatigue,17/03/2021
+Xa96S,Read,Tiredness   ,symptom,957 - res175: fatigue,17/03/2021
+XabDw,Read,Symptom Assessment Scale - fatigue score,symptom,957 - res175: fatigue,17/03/2021
+XaBEA,Read,[D] Post polio exhaustion                                                                           ,symptom,957 - res175: fatigue,17/03/2021
+XaEJ8,Read,Accommodative fatigue,diagnostic,957 - res175: fatigue,17/03/2021
+XaEXl,Read,Feeling tired                                                                                       ,symptom,957 - res175: fatigue,17/03/2021
+XaPeC,Read,Activity management for chronic fatigue syndrome,symptom,957 - res175: fatigue,17/03/2021
+XaPom,Read,Mild chronic fatigue syndrome   ,diagnostic,957 - res175: fatigue,17/03/2021
+XaPon,Read,Moderate chronic fatigue syndrome                                                                   ,diagnostic,957 - res175: fatigue,17/03/2021
+XaPoo,Read,Severe chronic fatigue syndrome                                                                     ,diagnostic,957 - res175: fatigue,17/03/2021
+XaR7C,Read,Referral to chronic fatigue syndrome specialist team,symptom,957 - res175: fatigue,17/03/2021
+XaRAz,Read,Referral for chronic fatigue syndrome activity management,symptom,957 - res175: fatigue,17/03/2021
+XE0qj,Read,Tiredness symptom                                                                                   ,symptom,957 - res175: fatigue,17/03/2021
+XE0qk,Read,TATT - Tired all the time   ,symptom,957 - res175: fatigue,17/03/2021
+XM06l,Read,Malaise and fatigue,symptom,957 - res175: fatigue,17/03/2021
+XM09R,Read,Senile exhaustion         ,symptom,957 - res175: fatigue,17/03/2021
+XM0D3,Read,Fatigue - symptom,symptom,957 - res175: fatigue,17/03/2021
+XM0D5,Read,"C/O - ""tired all the time""",symptom,957 - res175: fatigue,17/03/2021
+XM0yx,Read,Asthenia [D]   ,symptom,957 - res175: fatigue,17/03/2021
+XM1AV,Read,Asthenia,symptom,957 - res175: fatigue,17/03/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Headache/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Headache/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..1b6447e9540af731a14b46ba060746a78bbff60e
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diff --git a/example/clinical-codes-org/Symptom code lists/Headache/res175-headache.csv b/example/clinical-codes-org/Symptom code lists/Headache/res175-headache.csv
new file mode 100644
index 0000000..c1acec9
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Headache/res175-headache.csv	
@@ -0,0 +1,115 @@
+code,coding_system,description,entity,list_name,upload_date
+1474,Read,H/O: migraine,diagnostic,959 - res175: headache,17/03/2021
+ 1B1G.,Read,Headache (& [C/O]),diagnostic,959 - res175: headache,17/03/2021
+ 1B1G0,Read,Sinus headache,diagnostic,959 - res175: headache,17/03/2021
+ 1B1G1,Read,Viral headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BA..,Read,Headache site,diagnostic,959 - res175: headache,17/03/2021
+ 1BA2.,Read,Generalised headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BA3.,Read,Unilateral headache,diagnostic,959 - res175: headache,17/03/2021
+1BA3.,Read,One sided headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BA4.,Read,Bilateral headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BA5.,Read,(Frontal headache) or (pain in sinuses),diagnostic,959 - res175: headache,17/03/2021
+ 1BA6.,Read,Occipital headache,diagnostic,959 - res175: headache,17/03/2021
+1BA6.,Read,Occipital headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BA7.,Read,Parietal headache,diagnostic,959 - res175: headache,17/03/2021
+1BA7.,Read,Parietal headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BA8.,Read,Temporal headache,diagnostic,959 - res175: headache,17/03/2021
+1BA8.,Read,Temporal headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BAZ.,Read,Headache site NOS,diagnostic,959 - res175: headache,17/03/2021
+1BAZ.,Read,Headache site NOS,diagnostic,959 - res175: headache,17/03/2021
+ 1BB..,Read,Headache character,diagnostic,959 - res175: headache,17/03/2021
+1BB1.,Read,Aching headache,diagnostic,959 - res175: headache,17/03/2021
+1BB2.,Read,Throbbing headache,diagnostic,959 - res175: headache,17/03/2021
+1BB3.,Read,Shooting headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BB4.,Read,Morning headache,diagnostic,959 - res175: headache,17/03/2021
+ 1BB5.,Read,Heavy head,symptom,959 - res175: headache,17/03/2021
+1BBZ.,Read,Headache character NOS,diagnostic,959 - res175: headache,17/03/2021
+61461,Read,Headache caused by oral contraceptive pill,diagnostic,959 - res175: headache,17/03/2021
+ E2781,Read,Headache: [muscular] or [tension],diagnostic,959 - res175: headache,17/03/2021
+ F26..,Read,Migraine,diagnostic,959 - res175: headache,17/03/2021
+F260.,Read,Migraine with aura,diagnostic,959 - res175: headache,17/03/2021
+F261.,Read,Common migraine,diagnostic,959 - res175: headache,17/03/2021
+F2610,Read,Atypical migraine,diagnostic,959 - res175: headache,17/03/2021
+ F2611,Read,Sick headache,diagnostic,959 - res175: headache,17/03/2021
+ F261z,Read,Common migraine NOS,diagnostic,959 - res175: headache,17/03/2021
+F262.,Read,Migraine variants,diagnostic,959 - res175: headache,17/03/2021
+F2620,Read,Migrainous neuralgia,diagnostic,959 - res175: headache,17/03/2021
+ F2620,Read,Cluster headache syndrome,diagnostic,959 - res175: headache,17/03/2021
+F2623,Read,Basilar artery migraine,diagnostic,959 - res175: headache,17/03/2021
+ F2623,Read,Basilar migraine,diagnostic,959 - res175: headache,17/03/2021
+ F2624,Read,Ophthalmic migraine,diagnostic,959 - res175: headache,17/03/2021
+ F262z,Read,Migraine variant NOS,diagnostic,959 - res175: headache,17/03/2021
+F26y.,Read,Other forms of migraine,diagnostic,959 - res175: headache,17/03/2021
+ F26y0,Read,Hemiplegic migraine,diagnostic,959 - res175: headache,17/03/2021
+F26y1,Read,Ophthalmoplegic migraine,diagnostic,959 - res175: headache,17/03/2021
+F26y3,Read,Complicated migraine,diagnostic,959 - res175: headache,17/03/2021
+ F26yz,Read,Other forms of migraine NOS,diagnostic,959 - res175: headache,17/03/2021
+F26z.,Read,Migraine NOS,diagnostic,959 - res175: headache,17/03/2021
+ F2900,Read,Headache after: [lumbar puncture] or [myelogram],diagnostic,959 - res175: headache,17/03/2021
+Fyu53,Read,[X]Other migraine ,diagnostic,959 - res175: headache,17/03/2021
+ Fyu54,Read,[X]Other specified headache syndromes,diagnostic,959 - res175: headache,17/03/2021
+ Fyu5A,Read,[X]Vascular headache,diagnostic,959 - res175: headache,17/03/2021
+ Fyu5B,Read,[X]Drug-induced headache,diagnostic,959 - res175: headache,17/03/2021
+ K5A22,Read,Menopausal headache,diagnostic,959 - res175: headache,17/03/2021
+ L384.,Read,Obstetric spinal and epidural anaesthesia-induced headache,diagnostic,959 - res175: headache,17/03/2021
+ L3840,Read,Spinal and epidural anaesthesia-induced headache during pregnancy,diagnostic,959 - res175: headache,17/03/2021
+ L3841,Read,Spinal and epidural anaesthesia-induced headache during the puerperium,diagnostic,959 - res175: headache,17/03/2021
+ L387.,Read,Spinal and epidural anaesthesia-induced headache during labour and delivery,diagnostic,959 - res175: headache,17/03/2021
+R040.,Read,Headache,diagnostic,959 - res175: headache,17/03/2021
+R0400,Read,Facial pain,diagnostic,959 - res175: headache,17/03/2021
+X007a,Read,Chronic paroxysmal hemicrania,diagnostic,959 - res175: headache,17/03/2021
+X007b,Read,Atypical cluster headache,diagnostic,959 - res175: headache,17/03/2021
+ X007c,Read,Chronic post-traumatic headache,diagnostic,959 - res175: headache,17/03/2021
+ X007d,Read,Low pressure headache,diagnostic,959 - res175: headache,17/03/2021
+X007e,Read,Post dural puncture headache,diagnostic,959 - res175: headache,17/03/2021
+ X007f,Read,Headache following myelography,diagnostic,959 - res175: headache,17/03/2021
+X007h,Read,Ice-pick headache,diagnostic,959 - res175: headache,17/03/2021
+ X007h,Read,Idiopathic stabbing headache,diagnostic,959 - res175: headache,17/03/2021
+ X007i,Read,External compression headache,diagnostic,959 - res175: headache,17/03/2021
+X007I,Read,Headache disorder,diagnostic,959 - res175: headache,17/03/2021
+ X007J,Read,Migraine with typical aura,diagnostic,959 - res175: headache,17/03/2021
+ X007K,Read,Migraine with prolonged aura,diagnostic,959 - res175: headache,17/03/2021
+ X007L,Read,Familial hemiplegic migraine,diagnostic,959 - res175: headache,17/03/2021
+ X007M,Read,Non-familial hemiplegic migraine,diagnostic,959 - res175: headache,17/03/2021
+X007N,Read,Acephalgic migraine,diagnostic,959 - res175: headache,17/03/2021
+ X007N,Read,Migraine aura without headache,diagnostic,959 - res175: headache,17/03/2021
+ X007o,Read,Headache associated with substance abuse or withdrawal,diagnostic,959 - res175: headache,17/03/2021
+X007O,Read,Retinal migraine,diagnostic,959 - res175: headache,17/03/2021
+X007p,Read,Hangover from alcohol,diagnostic,959 - res175: headache,17/03/2021
+X007Q,Read,Alternating hemiplegia of childhood,diagnostic,959 - res175: headache,17/03/2021
+X007R,Read,Status migrainosus,diagnostic,959 - res175: headache,17/03/2021
+X007S,Read,Migraine with ischaemic complication,diagnostic,959 - res175: headache,17/03/2021
+X007T,Read,Muscular headache,diagnostic,959 - res175: headache,17/03/2021
+ X007T,Read,Muscular headache ,diagnostic,959 - res175: headache,17/03/2021
+X007U,Read,Episodic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+ X007U,Read,Episodic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+X007V,Read,Chronic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+ X007V,Read,Chronic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+X007W,Read,Episodic cluster headache,diagnostic,959 - res175: headache,17/03/2021
+X007X,Read,Chronic cluster headache,diagnostic,959 - res175: headache,17/03/2021
+ X007Y,Read,Chronic cluster headache unremitting from onset,diagnostic,959 - res175: headache,17/03/2021
+ X007Z,Read,Chronic cluster headache evolved from episodic cluster headache,diagnostic,959 - res175: headache,17/03/2021
+Xa07H,Read,Migraine - menstrual,diagnostic,959 - res175: headache,17/03/2021
+XaIsz,Read,Benign coital headache,diagnostic,959 - res175: headache,17/03/2021
+XaJLO,Read,Migraine prophylaxis,diagnostic,959 - res175: headache,17/03/2021
+XaLSP,Read,Medication overuse headache,diagnostic,959 - res175: headache,17/03/2021
+ XaMIU,Read,Increased frequency of headaches,diagnostic,959 - res175: headache,17/03/2021
+XaNTh,Read,Referral to headache special interest general practitioner,test,959 - res175: headache,17/03/2021
+XaNTj,Read,Seen by general practitioner with special interest in headache,test,959 - res175: headache,17/03/2021
+ XaQZd,Read,Chronic headache disorder,diagnostic,959 - res175: headache,17/03/2021
+XaXkr,Read,Migraine induced by oestrogen contraceptive,diagnostic,959 - res175: headache,17/03/2021
+XaXkv,Read,H/O migraine with aura,diagnostic,959 - res175: headache,17/03/2021
+XaXpZ,Read,Infrequent episodic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+ XaXpZ,Read,Infrequent episodic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+XaXrD,Read,Paroxysmal hemicrania,diagnostic,959 - res175: headache,17/03/2021
+ XaXsc,Read,Trigeminal autonomic cephalalgia,diagnostic,959 - res175: headache,17/03/2021
+XaXsF,Read,Frequent episodic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+ XaXsF,Read,Frequent episodic tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+XE0rh,Read,Headache,diagnostic,959 - res175: headache,17/03/2021
+ XE0s6,Read,Frontal headache,diagnostic,959 - res175: headache,17/03/2021
+ XE15e,Read,Headache following lumbar puncture,diagnostic,959 - res175: headache,17/03/2021
+ XE187,Read,(Cluster headaches) or (migrainous neuralgia) or (migraine NOS),diagnostic,959 - res175: headache,17/03/2021
+XE1Yl,Read,Stress headache,diagnostic,959 - res175: headache,17/03/2021
+ XE1Yl,Read,Tension-type headache,diagnostic,959 - res175: headache,17/03/2021
+XE2rs,Read,Pain in head NOS,diagnostic,959 - res175: headache,17/03/2021
+XM0CV,Read,C/O - a headache,diagnostic,959 - res175: headache,17/03/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Incontinence/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Incontinence/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..1efd93aaacd0aa199c6c0db2c4436087b0d52989
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diff --git a/example/clinical-codes-org/Symptom code lists/Incontinence/res11-incontinence.csv b/example/clinical-codes-org/Symptom code lists/Incontinence/res11-incontinence.csv
new file mode 100644
index 0000000..2fe6728
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Incontinence/res11-incontinence.csv	
@@ -0,0 +1,86 @@
+code,coding_system,description,entity,list_name,upload_date
+1593,Read,H/O: stress incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+16F..00,Read,Double incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+19E3.00,Read,Incontinent of faeces,diagnostic,141 - res11: incontinence,10/07/2014
+19E3.11,Read,Incontinent of faeces symptom,diagnostic,141 - res11: incontinence,10/07/2014
+1A23.00,Read,Incontinence of urine,diagnostic,141 - res11: incontinence,10/07/2014
+1A24.00,Read,Stress incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+1A24.11,Read,Stress incontinence - symptom,diagnostic,141 - res11: incontinence,10/07/2014
+1A25.00,Read,Urgency,diagnostic,141 - res11: incontinence,10/07/2014
+1A25.11,Read,Urgency of micturition,diagnostic,141 - res11: incontinence,10/07/2014
+1A26.00,Read,Urge incontinence of urine,diagnostic,141 - res11: incontinence,10/07/2014
+1A27.00,Read,Urge to pass urine again shortly after finishing voiding,diagnostic,141 - res11: incontinence,10/07/2014
+1A27.11,Read,Pis en deux,diagnostic,141 - res11: incontinence,10/07/2014
+1A36.00,Read,Terminal dribbling of urine,diagnostic,141 - res11: incontinence,10/07/2014
+1A37.00,Read,Dribbling of urine,diagnostic,141 - res11: incontinence,10/07/2014
+222K.00,Read,Smells of urine,diagnostic,141 - res11: incontinence,10/07/2014
+3930,Read,Bowels: incontinent,diagnostic,141 - res11: incontinence,10/07/2014
+3931,Read,Bowels: occasional accident,diagnostic,141 - res11: incontinence,10/07/2014
+393..11,Read,Bowels - continence,diagnostic,141 - res11: incontinence,10/07/2014
+393..12,Read,Bowels-incontinence assessment,diagnostic,141 - res11: incontinence,10/07/2014
+3940,Read,Bladder: incontinent,diagnostic,141 - res11: incontinence,10/07/2014
+3941,Read,Bladder: occasional accident,diagnostic,141 - res11: incontinence,10/07/2014
+394..11,Read,Bladder-incontinence assessmnt,diagnostic,141 - res11: incontinence,10/07/2014
+394..12,Read,Bladder- continence assessment,diagnostic,141 - res11: incontinence,10/07/2014
+39H..00,Read,Continence assessment,diagnostic,141 - res11: incontinence,10/07/2014
+39H0.00,Read,Continence reassessment,diagnostic,141 - res11: incontinence,10/07/2014
+679H.00,Read,Health education - continence,diagnostic,141 - res11: incontinence,10/07/2014
+679H.11,Read,Promotion of continence,diagnostic,141 - res11: incontinence,10/07/2014
+7B31200,Read,Colposuspension of bladder neck,diagnostic,141 - res11: incontinence,10/07/2014
+7B31211,Read,Burch colposuspension,diagnostic,141 - res11: incontinence,10/07/2014
+7B33800,Read,Insertion retropubic device stress urinary incontinence NEC,diagnostic,141 - res11: incontinence,10/07/2014
+7B33C00,Read,Insertion retropubic dev fem stress urinary incontinence NEC,diagnostic,141 - res11: incontinence,10/07/2014
+7B42100,Read,Insertion of bulbar urethral prosthesis,diagnostic,141 - res11: incontinence,10/07/2014
+7B42111,Read,Insertion of Kaufman prosthesis for male incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+7B42112,Read,Insertion of prosthesis for compression bulb of male urethra,diagnostic,141 - res11: incontinence,10/07/2014
+7B42113,Read,Insertion of Rosen prosthesis for male incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+7D17.11,Read,Colporrhaphy and amputation of cervix uteri,diagnostic,141 - res11: incontinence,10/07/2014
+8C14.00,Read,Incontinence care,diagnostic,141 - res11: incontinence,10/07/2014
+8C14.11,Read,Continence care,diagnostic,141 - res11: incontinence,10/07/2014
+8D7..00,Read,Urinary bladder control,diagnostic,141 - res11: incontinence,10/07/2014
+8D71.00,Read,Incontinence control,diagnostic,141 - res11: incontinence,10/07/2014
+8D7..11,Read,Bladder control,diagnostic,141 - res11: incontinence,10/07/2014
+8D7..12,Read,Incontinence control,diagnostic,141 - res11: incontinence,10/07/2014
+8D74.00,Read,Indwelling urethral catheter,diagnostic,141 - res11: incontinence,10/07/2014
+8D74.11,Read,Catheter in situ,diagnostic,141 - res11: incontinence,10/07/2014
+8D75.00,Read,Penile sheath provision,diagnostic,141 - res11: incontinence,10/07/2014
+8D7Z.00,Read,Urinary bladder control NOS,diagnostic,141 - res11: incontinence,10/07/2014
+8E97.00,Read,Bladder training,diagnostic,141 - res11: incontinence,10/07/2014
+8E97000,Read,Bladder drill,diagnostic,141 - res11: incontinence,10/07/2014
+8H7w.00,Read,Referral to continence nurse,diagnostic,141 - res11: incontinence,10/07/2014
+8HR6.00,Read,Refer to Urodynamic studies,diagnostic,141 - res11: incontinence,10/07/2014
+8HTX.00,Read,Referral to incontinence clinic,diagnostic,141 - res11: incontinence,10/07/2014
+9Nl8.00,Read,Seen by continence nurse,diagnostic,141 - res11: incontinence,10/07/2014
+K198.00,Read,Stress incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+K586.00,Read,Stress incontinence - female,diagnostic,141 - res11: incontinence,10/07/2014
+Kyu5A00,Read,[X]Other specified urinary incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+R076.00,Read,[D]Incontinence of faeces,diagnostic,141 - res11: incontinence,10/07/2014
+R076100,Read,[D]Sphincter ani incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+R076z00,Read,[D]Incontinence of faeces NOS,diagnostic,141 - res11: incontinence,10/07/2014
+R083.00,Read,[D]Incontinence of urine,diagnostic,141 - res11: incontinence,10/07/2014
+R083100,Read,[D]Urethral sphincter incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+R083200,Read,[D] Urge incontinence,diagnostic,141 - res11: incontinence,10/07/2014
+R083z00,Read,[D]Incontinence of urine NOS,diagnostic,141 - res11: incontinence,10/07/2014
+R086200,Read,[D] Urgency of micturition,diagnostic,141 - res11: incontinence,10/07/2014
+Z121400,Read,Assisting with toileting,diagnostic,141 - res11: incontinence,10/07/2014
+Z1J..00,Read,Procedures to aid continence,diagnostic,141 - res11: incontinence,10/07/2014
+Z1J1.00,Read,Taking the patient to toilet,diagnostic,141 - res11: incontinence,10/07/2014
+Z1J2.00,Read,Attaching penile sheath,diagnostic,141 - res11: incontinence,10/07/2014
+Z1J3.00,Read,Putting incontinence pad on,diagnostic,141 - res11: incontinence,10/07/2014
+Z1J4.00,Read,Changing incontinence pad,diagnostic,141 - res11: incontinence,10/07/2014
+Z1S..00,Read,Toileting regimes,diagnostic,141 - res11: incontinence,10/07/2014
+Z1S1.00,Read,Regular toileting,diagnostic,141 - res11: incontinence,10/07/2014
+Z1S2.00,Read,Planned voiding,diagnostic,141 - res11: incontinence,10/07/2014
+Z1S2100,Read,Planned voiding two hourly,diagnostic,141 - res11: incontinence,10/07/2014
+Z89A.00,Read,Ability to perform toileting activities,diagnostic,141 - res11: incontinence,10/07/2014
+Z89A100,Read,Does not perform toileting activities,diagnostic,141 - res11: incontinence,10/07/2014
+Z89A200,Read,Difficulty performing toileting activities,diagnostic,141 - res11: incontinence,10/07/2014
+Z89AE00,Read,Unable to use urine bottle,diagnostic,141 - res11: incontinence,10/07/2014
+Z915.00,Read,Urinary catheter appliance procedures,diagnostic,141 - res11: incontinence,10/07/2014
+Z915.11,Read,Urinary catheter care,diagnostic,141 - res11: incontinence,10/07/2014
+ZL22400,Read,Under care of continence nurse,diagnostic,141 - res11: incontinence,10/07/2014
+ZL62400,Read,Referral to continence nurse,diagnostic,141 - res11: incontinence,10/07/2014
+ZLA2400,Read,Seen by continence nurse,diagnostic,141 - res11: incontinence,10/07/2014
+ZLD7400,Read,Discharge by continence nurse,diagnostic,141 - res11: incontinence,10/07/2014
+ZQ3C.00,Read,Bowels incontinence assessment,diagnostic,141 - res11: incontinence,10/07/2014
+ZRas400,Read,OPCS continence disability scale,diagnostic,141 - res11: incontinence,10/07/2014
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Musculoskeletal pain/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Musculoskeletal pain/Where this code list comes from .docx
new file mode 100644
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diff --git a/example/clinical-codes-org/Symptom code lists/Musculoskeletal pain/res175-msk-pain.csv b/example/clinical-codes-org/Symptom code lists/Musculoskeletal pain/res175-msk-pain.csv
new file mode 100644
index 0000000..1f480c7
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Musculoskeletal pain/res175-msk-pain.csv	
@@ -0,0 +1,52 @@
+code,coding_system,description,entity,list_name,upload_date
+16C..,Read,Backache symptom,diagnostic,960 - res175: msk pain,17/03/2021
+16C2.,Read,Backache,diagnostic,960 - res175: msk pain,17/03/2021
+16C3.,Read,Backache with radiation,diagnostic,960 - res175: msk pain,17/03/2021
+16C4.,Read,Back pain worse on sneezing,diagnostic,960 - res175: msk pain,17/03/2021
+16C5.,Read,C/O - low back pain,symptom,960 - res175: msk pain,17/03/2021
+16C6.,Read,Back pain without radiation NOS,diagnostic,960 - res175: msk pain,17/03/2021
+16C7.,Read,C/O - upper back ache,symptom,960 - res175: msk pain,17/03/2021
+16CZ.,Read,Backache symptom NOS,diagnostic,960 - res175: msk pain,17/03/2021
+1DC8.,Read,Generalised aches and pains,diagnostic,960 - res175: msk pain,17/03/2021
+N131.,Read,Pain in neck (& [cervical spine]),diagnostic,960 - res175: msk pain,17/03/2021
+N142.,Read,(Back pain: [lumbar spine] or [low] or [acute lumbar]) or (lumbalgia) or (lumbago),diagnostic,960 - res175: msk pain,17/03/2021
+N1420,Read,Lumbago with sciatica,diagnostic,960 - res175: msk pain,17/03/2021
+N145.,Read,(Backache unspecified) or (back pain unspecified & [acute]),diagnostic,960 - res175: msk pain,17/03/2021
+N2410,Read,(Myalgia: [unspecified] or [intercostal myalgia]) or (muscle pain),diagnostic,960 - res175: msk pain,17/03/2021
+R00z2,Read,[D]General aches and pains,symptom,960 - res175: msk pain,17/03/2021
+X75rs,Read,Muscle pain,diagnostic,960 - res175: msk pain,17/03/2021
+X75rt,Read,Intercostal myalgia,diagnostic,960 - res175: msk pain,17/03/2021
+X75rz,Read,Acute back pain with sciatica,diagnostic,960 - res175: msk pain,17/03/2021
+X75s1,Read,Sacral back pain,diagnostic,960 - res175: msk pain,17/03/2021
+X75s3,Read,Posterior compartment low back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0sK,Read,Chronic low back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0sM,Read,Acute back pain - lumbar,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wj,Read,Pain in cervical spine,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wk,Read,Cervical trigger point syndrome,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wl,Read,Cervical segmental dysfunction,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wp,Read,Acute thoracic back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wq,Read,Thoracic trigger point syndrome,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wr,Read,Thoracic segmental dysfunction,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0ws,Read,Thoracic back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wt,Read,Low back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wu,Read,Mechanical low back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0wv,Read,Lumbar trigger point syndrome,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0ww,Read,Lumbar segmental dysfunction,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0xt,Read,Post-surgery back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa0yK,Read,Muscle tension pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa6tC,Read,Pain on movement of skeletal muscle,diagnostic,960 - res175: msk pain,17/03/2021
+Xa6YH,Read,Nuchal pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa7mB,Read,Postural low back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa7mE,Read,Psychogenic back pain,diagnostic,960 - res175: msk pain,17/03/2021
+Xa7ws,Read,Pain of head and neck region,diagnostic,960 - res175: msk pain,17/03/2021
+Xabu2,Read,Elongated styloid process syndrome,diagnostic,960 - res175: msk pain,17/03/2021
+XaIIv,Read,Chronic back pain,diagnostic,960 - res175: msk pain,17/03/2021
+XaINe,Read,Exacerbation of backache,diagnostic,960 - res175: msk pain,17/03/2021
+XE0rW,Read,Lumbar ache - renal,diagnostic,960 - res175: msk pain,17/03/2021
+XE1F4,Read,Neck pain,diagnostic,960 - res175: msk pain,17/03/2021
+XE1FB,Read,Pain in lumbar spine,diagnostic,960 - res175: msk pain,17/03/2021
+XE1FE,Read,Acute back pain - unspecified,diagnostic,960 - res175: msk pain,17/03/2021
+XE1Fm,Read,Myalgia unspecified,diagnostic,960 - res175: msk pain,17/03/2021
+XE1He,Read,(Backache NOS) or (back pain [& low]),diagnostic,960 - res175: msk pain,17/03/2021
+XE1HU,Read,(Cervicalgia) or (neck pain NOS),diagnostic,960 - res175: msk pain,17/03/2021
+XM1GI,Read,Back pain,diagnostic,960 - res175: msk pain,17/03/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Neuropathic pain/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Neuropathic pain/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..a7c5d985bc1c2c5af418b5a8e29ff1b1e03e9d69
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diff --git a/example/clinical-codes-org/Symptom code lists/Neuropathic pain/res55-neuropathic_pain.csv b/example/clinical-codes-org/Symptom code lists/Neuropathic pain/res55-neuropathic_pain.csv
new file mode 100644
index 0000000..9c12f1a
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Neuropathic pain/res55-neuropathic_pain.csv	
@@ -0,0 +1,25 @@
+code,coding_system,description,entity,list_name,upload_date,medcode
+1475,Read,H/O: trigeminal neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,16481
+A531.11,Read,Post-herpetic neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,1598
+A531200,Read,Postherpetic trigeminal neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,11498
+A531500,Read,Postzoster neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,17180
+A531511,Read,Postherpetic neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,10223
+F262100,Read,Horton's (histamine) neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,33362
+F262500,Read,Periodic migrainous neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,321
+F300.00,Read,Post-herpetic trigeminal neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,7584
+F301.00,Read,Other specified trigeminal neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,1541
+F301000,Read,Tic douloureux,diagnostic,635 - res55: neuropathic_pain,15/03/2017,4912
+F301z00,Read,Trigeminal neuralgia NOS,diagnostic,635 - res55: neuropathic_pain,15/03/2017,6581
+F321.00,Read,Glossopharyngeal neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,16932
+F336000,Read,Phantom limb syndrome with pain,diagnostic,635 - res55: neuropathic_pain,15/03/2017,18016
+F356100,Read,Morton's neuralgia,diagnostic,635 - res55: neuropathic_pain,15/03/2017,6884
+F370100,Read,Postinfectious polyneuritis,diagnostic,635 - res55: neuropathic_pain,15/03/2017,24216
+F372000,Read,Acute painful diabetic neuropathy,diagnostic,635 - res55: neuropathic_pain,15/03/2017,48078
+F372100,Read,Chronic painful diabetic neuropathy,diagnostic,635 - res55: neuropathic_pain,15/03/2017,35785
+FyuJ100,Read,[X]Retrobulbar neuritis in diseases classified elsewhere,diagnostic,635 - res55: neuropathic_pain,15/03/2017,72587
+N142000,Read,Lumbago with sciatica,diagnostic,635 - res55: neuropathic_pain,15/03/2017,14866
+N143.00,Read,Sciatica,diagnostic,635 - res55: neuropathic_pain,15/03/2017,313
+N143.11,Read,Acute back pain with sciatica,diagnostic,635 - res55: neuropathic_pain,15/03/2017,5840
+N242000,Read,Neuralgia unspecified,diagnostic,635 - res55: neuropathic_pain,15/03/2017,2284
+N242300,Read,Neuropathic pain,diagnostic,635 - res55: neuropathic_pain,15/03/2017,11544
+N242z00,Read,Neuralgia; neuritis or radiculitis NOS,diagnostic,635 - res55: neuropathic_pain,15/03/2017,23839
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Sleep problems/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Sleep problems/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..9de08d57d8499930e700cede118a2a38d7cb697a
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diff --git a/example/clinical-codes-org/Symptom code lists/Sleep problems/res175-sleep-problems.csv b/example/clinical-codes-org/Symptom code lists/Sleep problems/res175-sleep-problems.csv
new file mode 100644
index 0000000..affb99d
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Sleep problems/res175-sleep-problems.csv	
@@ -0,0 +1,193 @@
+code,coding_system,description,entity,list_name,upload_date
+1B1B0,Read,Initial insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ 1B1B0,Read,Initial insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+1B1B1,Read,Middle insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ 1B1B1,Read,Middle insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+1B1B2,Read,Late insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ 1B1B2,Read,Late insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ E274.,Read,Non-organic sleep disorders (& [hypersomnia] or [insomnia]),diagnostic,958 - res175: sleep problems,17/03/2021
+E274.,Read,Non-organic sleep disorders (& [hypersomnia] or [insomnia]),diagnostic,958 - res175: sleep problems,17/03/2021
+E2740,Read,Unspecified non-organic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+ E2740,Read,Unspecified non-organic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+E2741,Read,Insomnia: [transient] or [NOS],diagnostic,958 - res175: sleep problems,17/03/2021
+ E2741,Read,Insomnia: [transient] or [NOS],diagnostic,958 - res175: sleep problems,17/03/2021
+E2742,Read,Persistent insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ E2742,Read,Persistent insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+E2743,Read,Hypersomnia: [transient] or [NOS],diagnostic,958 - res175: sleep problems,17/03/2021
+ E2743,Read,Hypersomnia: [transient] or [NOS],diagnostic,958 - res175: sleep problems,17/03/2021
+E2744,Read,Persistent hypersomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ E2744,Read,Persistent hypersomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+E2745,Read,Jet lag - disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+E2746,Read,Work shift change,diagnostic,958 - res175: sleep problems,17/03/2021
+E2747,Read,Sleepwalking,diagnostic,958 - res175: sleep problems,17/03/2021
+ E2747,Read,Sleepwalking,diagnostic,958 - res175: sleep problems,17/03/2021
+E2748,Read,Night terrors,diagnostic,958 - res175: sleep problems,17/03/2021
+ E2748,Read,Night terrors,diagnostic,958 - res175: sleep problems,17/03/2021
+E2749,Read,Nightmares,diagnostic,958 - res175: sleep problems,17/03/2021
+ E2749,Read,Nightmares,diagnostic,958 - res175: sleep problems,17/03/2021
+E274A,Read,Sleep drunkenness,diagnostic,958 - res175: sleep problems,17/03/2021
+ E274A,Read,Sleep drunkenness,diagnostic,958 - res175: sleep problems,17/03/2021
+E274B,Read,Repeated rapid eye movement sleep interruptions,diagnostic,958 - res175: sleep problems,17/03/2021
+E274C,Read,Other sleep stage or arousal dysfunction,diagnostic,958 - res175: sleep problems,17/03/2021
+ E274C,Read,Other sleep stage or arousal dysfunction,diagnostic,958 - res175: sleep problems,17/03/2021
+E274D,Read,(Repetitive intrusions of sleep) or (restless sleep),diagnostic,958 - res175: sleep problems,17/03/2021
+ E274D,Read,(Repetitive intrusions of sleep) or (restless sleep),diagnostic,958 - res175: sleep problems,17/03/2021
+E274E,Read,Short-sleeper,diagnostic,958 - res175: sleep problems,17/03/2021
+ E274E,Read,Short-sleeper,diagnostic,958 - res175: sleep problems,17/03/2021
+E274F,Read,Reversed sleep-wake cycle,diagnostic,958 - res175: sleep problems,17/03/2021
+ E274y,Read,(Dreams) or (other non-organic sleep disorder),diagnostic,958 - res175: sleep problems,17/03/2021
+E274z,Read,Non-organic sleep disorder NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+ E274z,Read,Non-organic sleep disorder NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+Eu510,Read,Nonorganic insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ Eu510,Read,Nonorganic insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+Eu512,Read,[X] Nonorganic disorder of the sleep-wake schedule: [psychogenic inversion of circadian rhythm (incl,diagnostic,958 - res175: sleep problems,17/03/2021
+Eu515,Read,[X] Nightmares or dream anxiety disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+ Eu515,Read,[X] Nightmares or dream anxiety disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+Eu51y,Read,[X]Other nonorganic sleep disorders,diagnostic,958 - res175: sleep problems,17/03/2021
+ Eu51y,Read,[X]Other nonorganic sleep disorders,diagnostic,958 - res175: sleep problems,17/03/2021
+Eu51z,Read,[X]Nonorganic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+ Eu51z,Read,[X]Nonorganic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+ F27..,Read,Cataplexy and narcolepsy,diagnostic,958 - res175: sleep problems,17/03/2021
+F27..,Read,Cataplexy and narcolepsy,diagnostic,958 - res175: sleep problems,17/03/2021
+F270.,Read,Cataplexy,diagnostic,958 - res175: sleep problems,17/03/2021
+ F271.,Read,Narcoleptic syndrome,diagnostic,958 - res175: sleep problems,17/03/2021
+F271.,Read,Narcoleptic syndrome,diagnostic,958 - res175: sleep problems,17/03/2021
+F27z.,Read,Cataplexy or narcolepsy NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+ Fy00.,Read,Disorders of initiating and maintaining sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+Fy00.,Read,Disorders of initiating and maintaining sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ Fy01.,Read,Disorders of excessive somnolence,diagnostic,958 - res175: sleep problems,17/03/2021
+Fy01.,Read,Disorders of excessive somnolence,diagnostic,958 - res175: sleep problems,17/03/2021
+Fy03.,Read,Sleep apnoea (& [obstructive]),diagnostic,958 - res175: sleep problems,17/03/2021
+Fyu58,Read,[X]Other sleep disorders,diagnostic,958 - res175: sleep problems,17/03/2021
+ Fyu58,Read,[X]Other sleep disorders,diagnostic,958 - res175: sleep problems,17/03/2021
+R005.,Read,[D]Sleep disturbances,symptom,958 - res175: sleep problems,17/03/2021
+R0050,Read,[D]Sleep disturbance,symptom,958 - res175: sleep problems,17/03/2021
+ R0050,Read,[D]Sleep disturbance,diagnostic,958 - res175: sleep problems,17/03/2021
+R0052,Read,[D]Insomnia NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+ R0054,Read,[D]Hypersomnia NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+ R0055,Read,[D]Sleep rhythm inversion,diagnostic,958 - res175: sleep problems,17/03/2021
+ R0056,Read,[D]Sleep rhythm irregular,diagnostic,958 - res175: sleep problems,17/03/2021
+ R0057,Read,[D]Sleep-wake rhythm non-24-hour cycle,diagnostic,958 - res175: sleep problems,17/03/2021
+R0058,Read,[D]Sleep dysfunction with sleep stage disturbance,symptom,958 - res175: sleep problems,17/03/2021
+ R0058,Read,[D]Sleep dysfunction with sleep stage disturbance,diagnostic,958 - res175: sleep problems,17/03/2021
+ R0059,Read,[D]Sleep dysfunction with arousal disturbance,diagnostic,958 - res175: sleep problems,17/03/2021
+R005z,Read,[D]Sleep dysfunction NOS,symptom,958 - res175: sleep problems,17/03/2021
+ R005z,Read,[D]Sleep dysfunction NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+Ua15W,Read,Ability to sleep,symptom,958 - res175: sleep problems,17/03/2021
+Ua1ZQ,Read,Sleep talking,diagnostic,958 - res175: sleep problems,17/03/2021
+ Ua1ZQ,Read,Sleep talking,diagnostic,958 - res175: sleep problems,17/03/2021
+Ua1ZR,Read,Feels dreams are real,diagnostic,958 - res175: sleep problems,17/03/2021
+X007q,Read,Sleep-wake disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+X007s,Read,Insomnia NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+ X007s,Read,Insomnia NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+X007u,Read,Difficulty in sleep initiation,diagnostic,958 - res175: sleep problems,17/03/2021
+ X007u,Read,Difficulty getting to sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X007v,Read,Keeps waking up,diagnostic,958 - res175: sleep problems,17/03/2021
+ X007v,Read,Keeps waking up,diagnostic,958 - res175: sleep problems,17/03/2021
+X007w,Read,Excessive sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ X007w,Read,Excessive sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X007x,Read,Hypersomnia NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+ X007x,Read,Hypersomnia NOS,diagnostic,958 - res175: sleep problems,17/03/2021
+X007y,Read,Hypersomnia of non-organic origin,diagnostic,958 - res175: sleep problems,17/03/2021
+ X007y,Read,Hypersomnia of non-organic origin,diagnostic,958 - res175: sleep problems,17/03/2021
+X007z,Read,Excessive daytime sleepiness - normal night sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ X007z,Read,Excessive daytime sleepiness - normal night sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X0080,Read,Excessive day and night-time sleepiness,diagnostic,958 - res175: sleep problems,17/03/2021
+ X0080,Read,Excessive day and night-time sleepiness,diagnostic,958 - res175: sleep problems,17/03/2021
+X0081,Read,Postviral excessive daytime sleepiness,diagnostic,958 - res175: sleep problems,17/03/2021
+ X0081,Read,Postviral excessive daytime sleepiness,diagnostic,958 - res175: sleep problems,17/03/2021
+X0082,Read,Excess daytime sleepiness with sleep paralysis,diagnostic,958 - res175: sleep problems,17/03/2021
+ X0082,Read,Excess daytime sleepiness with sleep paralysis,diagnostic,958 - res175: sleep problems,17/03/2021
+ X0083,Read,Sleep apnoea,diagnostic,958 - res175: sleep problems,17/03/2021
+X0084,Read,Obstructive sleep apnoea,diagnostic,958 - res175: sleep problems,17/03/2021
+X0085,Read,Central sleep apnoea,diagnostic,958 - res175: sleep problems,17/03/2021
+X0086,Read,Mixed sleep apnoea,diagnostic,958 - res175: sleep problems,17/03/2021
+X0087,Read,Alveolar sleep apnoea,diagnostic,958 - res175: sleep problems,17/03/2021
+X0088,Read,Transient sleep-wake rhythm disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+X0089,Read,Delayed sleep phase syndrome,diagnostic,958 - res175: sleep problems,17/03/2021
+X008A,Read,Non-24 hour sleep-wake cycle,diagnostic,958 - res175: sleep problems,17/03/2021
+X008C,Read,Sleep-related head banging,diagnostic,958 - res175: sleep problems,17/03/2021
+ X008C,Read,Sleep-related head banging,diagnostic,958 - res175: sleep problems,17/03/2021
+ X008D,Read,Sleep-related painful erections,diagnostic,958 - res175: sleep problems,17/03/2021
+ X008E,Read,Kleine-Levin syndrome,diagnostic,958 - res175: sleep problems,17/03/2021
+ X008F,Read,Sleep-related respiratory failure,diagnostic,958 - res175: sleep problems,17/03/2021
+ X008G,Read,Sleep-related dystonia,diagnostic,958 - res175: sleep problems,17/03/2021
+X008H,Read,Parasomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ X008H,Read,Parasomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+X7649,Read,Reaction to sudden wakening,diagnostic,958 - res175: sleep problems,17/03/2021
+ X7649,Read,Reaction to sudden wakening,diagnostic,958 - res175: sleep problems,17/03/2021
+X764A,Read,Dreams,diagnostic,958 - res175: sleep problems,17/03/2021
+ X764A,Read,Dreams,diagnostic,958 - res175: sleep problems,17/03/2021
+X764B,Read,Detailed recall of dream,diagnostic,958 - res175: sleep problems,17/03/2021
+X764C,Read,Repetitive dreams,diagnostic,958 - res175: sleep problems,17/03/2021
+X764K,Read,Sleep automatism,diagnostic,958 - res175: sleep problems,17/03/2021
+ X764K,Read,Sleep automatism,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AE,Read,Sleep rhythm problem,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AE,Read,Sleep rhythm problem,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AF,Read,Cannot sleep at all,symptom,958 - res175: sleep problems,17/03/2021
+ X76AF,Read,Cannot sleep at all,symptom,958 - res175: sleep problems,17/03/2021
+X76AG,Read,Not getting enough sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AG,Read,Not getting enough sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AJ,Read,Wakes and cannot sleep again,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AJ,Read,Wakes and cannot sleep again,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AK,Read,Early waking,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AK,Read,Early waking,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AL,Read,Circumstances interfere with sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AL,Read,Circumstances interfere with sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AM,Read,Symptoms interfere with sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AM,Read,Symptoms interfere with sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AN,Read,Tosses and turns in sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AN,Read,Restless sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AO,Read,Unrefreshed by sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AO,Read,Unrefreshed by sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AQ,Read,Oversleeps,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AQ,Read,Oversleeps,diagnostic,958 - res175: sleep problems,17/03/2021
+X76AR,Read,Always sleepy,diagnostic,958 - res175: sleep problems,17/03/2021
+ X76AR,Read,Always sleepy,diagnostic,958 - res175: sleep problems,17/03/2021
+Xa0Kk,Read,Sleep paralysis,diagnostic,958 - res175: sleep problems,17/03/2021
+Xa0Kl,Read,Sleep starts,diagnostic,958 - res175: sleep problems,17/03/2021
+ Xa0Kl,Read,Sleep starts,diagnostic,958 - res175: sleep problems,17/03/2021
+Xa2bY,Read,Sleepy,symptom,958 - res175: sleep problems,17/03/2021
+Xa7wV,Read,Poor sleep,symptom,958 - res175: sleep problems,17/03/2021
+ Xa7wV,Read,Difficulty sleeping,symptom,958 - res175: sleep problems,17/03/2021
+ XaC0p,Read,[D]Hypersomnia ,diagnostic,958 - res175: sleep problems,17/03/2021
+XaFqr,Read,Poor sleep pattern,symptom,958 - res175: sleep problems,17/03/2021
+XaIti,Read,Delayed onset of sleep,symptom,958 - res175: sleep problems,17/03/2021
+XaIv5,Read,Early morning waking,diagnostic,958 - res175: sleep problems,17/03/2021
+XaJEd,Read,Nocturnal sleep-related eating disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+ XaJEd,Read,Nocturnal sleep-related eating disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+"XaP4v	",Read,Sleep hygiene behaviour education,drug,958 - res175: sleep problems,17/03/2021
+XaYGN,Read,Able to sleep with sedation,symptom,958 - res175: sleep problems,17/03/2021
+ XaYGN,Read,Able to sleep with sedation,symptom,958 - res175: sleep problems,17/03/2021
+ XaYGO,Read,Able to sleep without sedation,symptom,958 - res175: sleep problems,17/03/2021
+XaZKa,Read,Excessive somnolence,symptom,958 - res175: sleep problems,17/03/2021
+ XaZKa,Read,Excessive somnolence,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE0ux,Read,Insomnia (& symptom) or somnolence,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE1bI,Read,Sleep disorders (& [insomnia] or [nightmares] or [sleepwalking (& somnambulism)]),diagnostic,958 - res175: sleep problems,17/03/2021
+XE1gP,Read,[D]Sleep dysfunction NEC,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE1gP,Read,[D]Sleep dysfunction NEC,symptom,958 - res175: sleep problems,17/03/2021
+XE1Yg,Read,Transient insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE1Yg,Read,Transient insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+XE1Yh,Read,Transient hypersomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE1Yh,Read,Transient hypersomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+XE1Yi,Read,Repetitive intrusions of sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE1Yi,Read,Repetitive intrusions of sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+XE1Yj,Read,Other non-organic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE1Yj,Read,Other non-organic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+XE1Zr,Read,Non-organic disorder of the sleep-wake schedule,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE1Zr,Read,Non-organic disorder of the sleep-wake schedule,diagnostic,958 - res175: sleep problems,17/03/2021
+XE2Pv,Read,Insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE2Pv,Read,Insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+XE2Q5,Read,Non-organic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+ XE2Q5,Read,Non-organic sleep disorder,diagnostic,958 - res175: sleep problems,17/03/2021
+XM06i,Read,Dyssomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+ XM06i,Read,Dyssomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+XM06j,Read,Irregular sleep-wake pattern,diagnostic,958 - res175: sleep problems,17/03/2021
+XM06k,Read,Disorder of sleep-wake cycle,diagnostic,958 - res175: sleep problems,17/03/2021
+ XM06k,Read,Disorder of sleep-wake cycle,diagnostic,958 - res175: sleep problems,17/03/2021
+XM06R,Read,Sleepiness,symptom,958 - res175: sleep problems,17/03/2021
+XM0yu,Read,[D]Insomnia,diagnostic,958 - res175: sleep problems,17/03/2021
+XM1GE,Read,Sleep-related bruxism,diagnostic,958 - res175: sleep problems,17/03/2021
+ XM1GE,Read,Sleep-related bruxism,diagnostic,958 - res175: sleep problems,17/03/2021
+XSGLz,Read,Light sleep,diagnostic,958 - res175: sleep problems,17/03/2021
+ XSGLz,Read,Light sleep,diagnostic,958 - res175: sleep problems,17/03/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Symptom code lists/Stress/Where this code list comes from .docx b/example/clinical-codes-org/Symptom code lists/Stress/Where this code list comes from .docx
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diff --git a/example/clinical-codes-org/Symptom code lists/Stress/res175-stress.csv b/example/clinical-codes-org/Symptom code lists/Stress/res175-stress.csv
new file mode 100644
index 0000000..77cf0e5
--- /dev/null
+++ b/example/clinical-codes-org/Symptom code lists/Stress/res175-stress.csv	
@@ -0,0 +1,86 @@
+code,coding_system,description,entity,list_name,upload_date
+1B1L.,Read,Stress-related problem,diagnostic,956 - res175: stress,17/03/2021
+E28..,Read,Acute reaction to stress (& [combat fatigue]),diagnostic,956 - res175: stress,17/03/2021
+E280.,Read,Acute panic state due to acute stress reaction,diagnostic,956 - res175: stress,17/03/2021
+E281.,Read,Acute fugue state due to acute stress reaction,diagnostic,956 - res175: stress,17/03/2021
+E282.,Read,Acute stupor state due to acute stress reaction,diagnostic,956 - res175: stress,17/03/2021
+E283.,Read,Other acute stress reactions,diagnostic,956 - res175: stress,17/03/2021
+E2830,Read,Acute situational disturbance,diagnostic,956 - res175: stress,17/03/2021
+E2831,Read,Acute post-trauma stress state,diagnostic,956 - res175: stress,17/03/2021
+E283z,Read,Other acute stress reaction NOS,diagnostic,956 - res175: stress,17/03/2021
+E284.,Read,Stress reaction causing mixed disturbance of emotion and conduct,diagnostic,956 - res175: stress,17/03/2021
+E29..,Read,Adjustment disorder,diagnostic,956 - res175: stress,17/03/2021
+E290.,Read,Brief depressive adjustment reaction,diagnostic,956 - res175: stress,17/03/2021
+E290z,Read,Brief depressive reaction NOS,diagnostic,956 - res175: stress,17/03/2021
+E291.,Read,Prolonged depressive adjustment reaction,diagnostic,956 - res175: stress,17/03/2021
+E292.,Read,Adjustment reaction with predominant disturbance of other emotions,diagnostic,956 - res175: stress,17/03/2021
+E2921,Read,Adolescent emancipation disorder,diagnostic,956 - res175: stress,17/03/2021
+E2922,Read,Early adult emancipation disorder,diagnostic,956 - res175: stress,17/03/2021
+E2923,Read,Specific academic &/or work inhibition,symptom,956 - res175: stress,17/03/2021
+E2924,Read,Adjustment reaction with anxious mood,diagnostic,956 - res175: stress,17/03/2021
+E2925,Read,Culture shock,diagnostic,956 - res175: stress,17/03/2021
+E292y,Read,Adjustment reaction with mixed disturbance of emotion,diagnostic,956 - res175: stress,17/03/2021
+E292z,Read,Adjustment reaction with disturbance of other emotion NOS,diagnostic,956 - res175: stress,17/03/2021
+E293.,Read,Adjustment reaction with predominant disturbance of conduct,diagnostic,956 - res175: stress,17/03/2021
+E2930,Read,Adjustment reaction with aggression,diagnostic,956 - res175: stress,17/03/2021
+E2931,Read,Adjustment reaction with antisocial behaviour,diagnostic,956 - res175: stress,17/03/2021
+E2932,Read,Adjustment reaction with destructiveness,diagnostic,956 - res175: stress,17/03/2021
+E293z,Read,Adjustment reaction with predominant disturbance of conduct NOS,diagnostic,956 - res175: stress,17/03/2021
+E294.,Read,Adjustment reaction with mixed disturbance of emotion and conduct,diagnostic,956 - res175: stress,17/03/2021
+E29y.,Read,Other adjustment reactions,diagnostic,956 - res175: stress,17/03/2021
+E29y0,Read,Concentration camp syndrome,diagnostic,956 - res175: stress,17/03/2021
+E29y1,Read,Other post-traumatic stress disorder,diagnostic,956 - res175: stress,17/03/2021
+E29y2,Read,Adjustment reaction with physical symptoms,diagnostic,956 - res175: stress,17/03/2021
+E29y3,Read,Elective mutism due to an adjustment reaction,diagnostic,956 - res175: stress,17/03/2021
+E29y5,Read,Other adjustment reaction with withdrawal,diagnostic,956 - res175: stress,17/03/2021
+E29yz,Read,Other adjustment reactions NOS,diagnostic,956 - res175: stress,17/03/2021
+E29z.,Read,Adjustment reaction NOS,diagnostic,956 - res175: stress,17/03/2021
+Eu4..,Read,[X]Neurotic,diagnostic,956 - res175: stress,17/03/2021
+Eu40.,Read,[X]Phobic anxiety disorders,diagnostic,956 - res175: stress,17/03/2021
+Eu40y,Read,[X]Other phobic anxiety disorders,diagnostic,956 - res175: stress,17/03/2021
+Eu40z,Read,[X]Phobic anxiety disorder Unspecified,diagnostic,956 - res175: stress,17/03/2021
+Eu41.,Read,[X]Other anxiety disorders,diagnostic,956 - res175: stress,17/03/2021
+Eu413,Read,[X]Other mixed anxiety disorders,diagnostic,956 - res175: stress,17/03/2021
+Eu41z,Read,[X]Anxiety disorder  unspecified,diagnostic,956 - res175: stress,17/03/2021
+Eu430,Read,[X] Acute stress reaction (& [crisis reaction] or [crisis state] or [psychic shock] or [combat fatig,diagnostic,956 - res175: stress,17/03/2021
+Eu432,Read,[X] Adjustment disorders (& [culture shock] or [grief reaction] or [hospitalism in children]),diagnostic,956 - res175: stress,17/03/2021
+Eu43y,Read,[X]Other reactions to severe stress,diagnostic,956 - res175: stress,17/03/2021
+Eu43z,Read,[X]Reaction to severe stress  unspecified,diagnostic,956 - res175: stress,17/03/2021
+Eu46.,Read,[X]Other neurotic disorders,diagnostic,956 - res175: stress,17/03/2021
+Eu46z,Read,[X]Neurotic disorder  unspecified,diagnostic,956 - res175: stress,17/03/2021
+K586.,Read,Stress incontinence - female,diagnostic,956 - res175: stress,17/03/2021
+Ry15.,Read,[D]Undue concern and preoccupation with stressful events,symptom,956 - res175: stress,17/03/2021
+Ryu58,Read,[X]State of emotional shock and stress  unspecified,symptom,956 - res175: stress,17/03/2021
+Ua165,Read,Feeling stressed,symptom,956 - res175: stress,17/03/2021
+Ub014,Read,Stress management,symptom,956 - res175: stress,17/03/2021
+X00Sf,Read,Post-traumatic stress disorder,diagnostic,956 - res175: stress,17/03/2021
+X301U,Read,Stress-related gastritis,diagnostic,956 - res175: stress,17/03/2021
+X76AY,Read,Work stress,symptom,956 - res175: stress,17/03/2021
+Xa18j,Read,Combat fatigue,diagnostic,956 - res175: stress,17/03/2021
+Xa18v,Read,Shell shock,diagnostic,956 - res175: stress,17/03/2021
+Xa7mz,Read,Carer stress syndrome,diagnostic,956 - res175: stress,17/03/2021
+Xa8HQ,Read,Tower block syndrome,diagnostic,956 - res175: stress,17/03/2021
+Xa8HR,Read,Wife unable to cope,symptom,956 - res175: stress,17/03/2021
+XaA2F,Read,Stress mapping,symptom,956 - res175: stress,17/03/2021
+XaBUD,Read,Stress monitoring call,symptom,956 - res175: stress,17/03/2021
+XaEFB,Read,Chronic post-traumatic stress disorder,diagnostic,956 - res175: stress,17/03/2021
+XaI8j,Read,Stress counselling,symptom,956 - res175: stress,17/03/2021
+XaJgP,Read,Stress-induced epilepsy,diagnostic,956 - res175: stress,17/03/2021
+XaWye,Read,Stress cardiomyopathy,diagnostic,956 - res175: stress,17/03/2021
+XaX55,Read,Acute post-traumatic stress disorder following military combat,diagnostic,956 - res175: stress,17/03/2021
+XaX56,Read,Chronic post-traumatic stress disorder following military combat,diagnostic,956 - res175: stress,17/03/2021
+XaX58,Read,Delayed post-traumatic stress disorder following military combat,diagnostic,956 - res175: stress,17/03/2021
+XE0pM,Read,Stress at home,symptom,956 - res175: stress,17/03/2021
+XE0rR,Read,Stress incontinence,symptom,956 - res175: stress,17/03/2021
+XE1bo,Read,Acute reaction to stress (& [post-traumatic] or [shell-shock]),diagnostic,956 - res175: stress,17/03/2021
+XE1Ym,Read,Acute stress reaction,diagnostic,956 - res175: stress,17/03/2021
+XE1Yn,Read,Acute stress reaction NOS,diagnostic,956 - res175: stress,17/03/2021
+XE1Yp,Read,Specific academic or work inhibition,diagnostic,956 - res175: stress,17/03/2021
+XE1Zj,Read,[X]Other specified anxiety disorders,diagnostic,956 - res175: stress,17/03/2021
+XE2Nh,Read,Stress monitoring admin.,symptom,956 - res175: stress,17/03/2021
+XM0As,Read,Stress and adjustment reaction,diagnostic,956 - res175: stress,17/03/2021
+XM1aI,Read,Stress at work,symptom,956 - res175: stress,17/03/2021
+XM1Am,Read,Undue concern and preoccupation with stressful events,symptom,956 - res175: stress,17/03/2021
+XM1Q3,Read,Specific work inhibition,symptom,956 - res175: stress,17/03/2021
+ZV4B2,Read,Stressful work schedule,symptom,956 - res175: stress,17/03/2021
+ZVu4E,Read,[X]Other stressful life events affecting family and household,symptom,956 - res175: stress,17/03/2021
\ No newline at end of file
diff --git a/example/clinical-codes-org/Tuberculosis/Where this code list comes from .docx b/example/clinical-codes-org/Tuberculosis/Where this code list comes from .docx
new file mode 100644
index 0000000000000000000000000000000000000000..6337d1d49d51a77473ddd062daa79c899b3f70a1
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HcmV?d00001

diff --git a/example/clinical-codes-org/Tuberculosis/phenotype_PH87_ver_174_concepts_20230719T113229.csv b/example/clinical-codes-org/Tuberculosis/phenotype_PH87_ver_174_concepts_20230719T113229.csv
new file mode 100644
index 0000000..97f69f9
--- /dev/null
+++ b/example/clinical-codes-org/Tuberculosis/phenotype_PH87_ver_174_concepts_20230719T113229.csv
@@ -0,0 +1,493 @@
+code,description,coding_system,concept_id,concept_version_id,concept_name,phenotype_id,phenotype_version_id,phenotype_name,code_attributes
+1411,H/O: tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '5319.0', 'Category': 'History of tuberculosis'}"
+14P9.00,History of tuberculosis drug therapy,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '100469.0', 'Category': 'History of tuberculosis'}"
+65V9.00,Notification of tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '32180.0', 'Category': 'Diagnosis of tuberculosis'}"
+65V9.11,TB - tuberculosis notification,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '16582.0', 'Category': 'Diagnosis of tuberculosis'}"
+65Y1.00,On tuberculosis chemoprophylaxis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '47016.0', 'Category': 'Diagnosis of tuberculosis'}"
+65Y2.00,Streptomycin resistant tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '91666.0', 'Category': 'Diagnosis of tuberculosis'}"
+65Y5.00,Isoniazid resistant tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '102673.0', 'Category': 'Diagnosis of tuberculosis'}"
+65Y8.00,Ciprofloxacin resistant tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '97525.0', 'Category': 'Diagnosis of tuberculosis'}"
+65Y9.00,Inactive tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '96477.0', 'Category': 'Diagnosis of tuberculosis'}"
+65Y9.11,Latent tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '95913.0', 'Category': 'Diagnosis of tuberculosis'}"
+8BAD100,TB chemotherapy,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '4247.0', 'Category': 'Diagnosis of tuberculosis'}"
+A1...00,Tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '1840.0', 'Category': 'Diagnosis of tuberculosis'}"
+A10..00,Primary tuberculous infection,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '22011.0', 'Category': 'Diagnosis of tuberculosis'}"
+A100.00,Primary tuberculous complex,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '16265.0', 'Category': 'Diagnosis of tuberculosis'}"
+A101.00,Tuberculous pleurisy in primary progressive tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46272.0', 'Category': 'Diagnosis of tuberculosis'}"
+A10y.00,Other primary progressive tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '42630.0', 'Category': 'Diagnosis of tuberculosis'}"
+A10z.00,Primary tuberculous infection NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '37694.0', 'Category': 'Diagnosis of tuberculosis'}"
+A11..00,Pulmonary tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '635.0', 'Category': 'Diagnosis of tuberculosis'}"
+A11..11,Lung tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '47336.0', 'Category': 'Diagnosis of tuberculosis'}"
+A110.00,Infiltrative lung tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '53701.0', 'Category': 'Diagnosis of tuberculosis'}"
+A111.00,Nodular lung tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '48580.0', 'Category': 'Diagnosis of tuberculosis'}"
+A112.00,Tuberculosis of lung with cavitation,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '16331.0', 'Category': 'Diagnosis of tuberculosis'}"
+A113.00,Tuberculosis of bronchus,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '62468.0', 'Category': 'Diagnosis of tuberculosis'}"
+A114.00,Tuberculous fibrosis of lung,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '16741.0', 'Category': 'Diagnosis of tuberculosis'}"
+A115.00,Tuberculous bronchiectasis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '15693.0', 'Category': 'Diagnosis of tuberculosis'}"
+A116.00,Tuberculous pneumonia,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '9953.0', 'Category': 'Diagnosis of tuberculosis'}"
+A117.00,Tuberculous pneumothorax,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '66441.0', 'Category': 'Diagnosis of tuberculosis'}"
+A11y.00,Other specified pulmonary tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '18950.0', 'Category': 'Diagnosis of tuberculosis'}"
+A11z.00,Pulmonary tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '38110.0', 'Category': 'Diagnosis of tuberculosis'}"
+A12..00,Other respiratory tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '63959.0', 'Category': 'Diagnosis of tuberculosis'}"
+A120.00,Tuberculous pleurisy,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '23472.0', 'Category': 'Diagnosis of tuberculosis'}"
+A120000,Tuberculosis of pleura,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '37834.0', 'Category': 'Diagnosis of tuberculosis'}"
+A120100,Tuberculous empyema,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '39512.0', 'Category': 'Diagnosis of tuberculosis'}"
+A120200,Tuberculous hydrothorax,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '14913.0', 'Category': 'Diagnosis of tuberculosis'}"
+A120z00,Tuberculous pleurisy NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '56890.0', 'Category': 'Diagnosis of tuberculosis'}"
+A121.00,Tuberculosis of intrathoracic lymph nodes,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '58827.0', 'Category': 'Diagnosis of tuberculosis'}"
+A121000,Tuberculosis of hilar lymph nodes,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '5145.0', 'Category': 'Diagnosis of tuberculosis'}"
+A121100,Tuberculosis of mediastinal lymph nodes,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '44129.0', 'Category': 'Diagnosis of tuberculosis'}"
+A121200,Tuberculosis of tracheobronchial lymph nodes,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '49503.0', 'Category': 'Diagnosis of tuberculosis'}"
+A121z00,Tuberculosis of intrathoracic lymph nodes NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46926.0', 'Category': 'Diagnosis of tuberculosis'}"
+A122.00,Isolated tracheal or bronchial tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '69260.0', 'Category': 'Diagnosis of tuberculosis'}"
+A122000,Isolated tracheal tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '93015.0', 'Category': 'Diagnosis of tuberculosis'}"
+A122100,Isolated bronchial tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '93948.0', 'Category': 'Diagnosis of tuberculosis'}"
+A122z00,Isolated tracheal or bronchial tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '53473.0', 'Category': 'Diagnosis of tuberculosis'}"
+A123.00,Tuberculous laryngitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '20333.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124.00,Resp TB bacteriologically and histologically confirmed,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '31670.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124000,TB lung confirm sputum microscopy with or without culture,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '24413.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124100,"Tuberculosis of lung, confirmed by culture only",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '93071.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124200,"Tuberculosis of lung, confirmed histologically",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '62530.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124300,"Tuberculosis of lung, confirmed by unspecified means",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '58588.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124400,TB intrathoracic lymph nodes confirm bact histologically,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '44655.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124500,"Tuberculosis of larynx, trachea & bronchus conf bact/hist'y",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '44039.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124600,"Tuberculous pleurisy, conf bacteriologically/histologically",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '35443.0', 'Category': 'Diagnosis of tuberculosis'}"
+A124700,Primary respiratory TB confirm bact and histologically,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '24517.0', 'Category': 'Diagnosis of tuberculosis'}"
+A125.00,Respiratory TB not confirmed bact or histologically,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '7133.0', 'Category': 'Diagnosis of tuberculosis'}"
+A125000,"Tuberculosis of lung, bacteriologically & histolog'y neg",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '47832.0', 'Category': 'Diagnosis of tuberculosis'}"
+A125100,Tuberculosis lung bact and histological examin not done,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '41051.0', 'Category': 'Diagnosis of tuberculosis'}"
+A125200,Prim respiratory TB without mention of bact or hist confirm,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '40605.0', 'Category': 'Diagnosis of tuberculosis'}"
+A125X00,"Resp TB unspcf,w'out mention/bacterial or histol confrmtn",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '69471.0', 'Category': 'Diagnosis of tuberculosis'}"
+A12y.00,Other specified respiratory tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '50902.0', 'Category': 'Diagnosis of tuberculosis'}"
+A12y000,Tuberculosis of mediastinum,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '37598.0', 'Category': 'Diagnosis of tuberculosis'}"
+A12y100,Tuberculosis of nasopharynx,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '72402.0', 'Category': 'Diagnosis of tuberculosis'}"
+A12y200,Tuberculosis of nasal septum,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '97658.0', 'Category': 'Diagnosis of tuberculosis'}"
+A12y300,Tuberculosis of nasal sinus,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '45861.0', 'Category': 'Diagnosis of tuberculosis'}"
+A12yz00,Other specified respiratory tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '50147.0', 'Category': 'Diagnosis of tuberculosis'}"
+A13..00,Tuberculosis of meninges and central nervous system,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '41208.0', 'Category': 'Diagnosis of tuberculosis'}"
+A130.00,Tuberculous meningitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '11975.0', 'Category': 'Diagnosis of tuberculosis'}"
+A130000,Tuberculosis of cerebral meninges,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '54840.0', 'Category': 'Diagnosis of tuberculosis'}"
+A130100,Tuberculosis of spinal meninges,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46802.0', 'Category': 'Diagnosis of tuberculosis'}"
+A130300,Tuberculous meningoencephalitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '43791.0', 'Category': 'Diagnosis of tuberculosis'}"
+A130z00,Tuberculous meningitis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '69322.0', 'Category': 'Diagnosis of tuberculosis'}"
+A131.00,Tuberculoma of meninges,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '57417.0', 'Category': 'Diagnosis of tuberculosis'}"
+A132.00,Tuberculoma of brain,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '52199.0', 'Category': 'Diagnosis of tuberculosis'}"
+A133.00,Tuberculous abscess of brain,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '57398.0', 'Category': 'Diagnosis of tuberculosis'}"
+A134.00,Tuberculoma of spinal cord,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46039.0', 'Category': 'Diagnosis of tuberculosis'}"
+A135.00,Tuberculous abscess of spinal cord,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46044.0', 'Category': 'Diagnosis of tuberculosis'}"
+A136.00,Tuberculous encephalitis or myelitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '59202.0', 'Category': 'Diagnosis of tuberculosis'}"
+A136000,Tuberculous encephalitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '93360.0', 'Category': 'Diagnosis of tuberculosis'}"
+A136100,Tuberculous myelitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '31680.0', 'Category': 'Diagnosis of tuberculosis'}"
+A136z00,Tuberculous encephalitis or myelitis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '72072.0', 'Category': 'Diagnosis of tuberculosis'}"
+A13y.00,Other specified tuberculosis of central nervous system,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '41383.0', 'Category': 'Diagnosis of tuberculosis'}"
+A13z.00,Tuberculosis of central nervous system NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '70140.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14..00,"Tuberculosis of intestines, peritoneum and mesenteric glands",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '2193.0', 'Category': 'Diagnosis of tuberculosis'}"
+A140.00,Tuberculous peritonitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '31409.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14y.00,Other gastrointestinal tract tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '54570.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14y100,Tuberculosis of large intestine,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '39279.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14y200,Tuberculosis of small intestine,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '31436.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14y300,Tuberculosis of mesenteric lymph glands,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '29482.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14y400,Tuberculosis of rectum,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '59087.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14y500,Tuberculosis of retroperitoneal lymph nodes,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '49433.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14yz00,Other gastrointestinal tract tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '33372.0', 'Category': 'Diagnosis of tuberculosis'}"
+A14z.00,Tuberculosis of gastrointestinal tract NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '54579.0', 'Category': 'Diagnosis of tuberculosis'}"
+A15..00,Tuberculosis of bones and joints,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '3596.0', 'Category': 'Diagnosis of tuberculosis'}"
+A15..11,Tuberculous osteomylelytis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '22572.0', 'Category': 'Diagnosis of tuberculosis'}"
+A15..12,Tuberculous arthritis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '24626.0', 'Category': 'Diagnosis of tuberculosis'}"
+A15..13,Tuberculous synovitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '45318.0', 'Category': 'Diagnosis of tuberculosis'}"
+A150.00,Tuberculosis of vertebral column - Pott's,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '3273.0', 'Category': 'Diagnosis of tuberculosis'}"
+A151.00,Tuberculosis of hip,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '2208.0', 'Category': 'Diagnosis of tuberculosis'}"
+A152.00,Tuberculosis of knee,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '23451.0', 'Category': 'Diagnosis of tuberculosis'}"
+A153.00,Tuberculosis limb bones - Tuberculous dactylitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '4907.0', 'Category': 'Diagnosis of tuberculosis'}"
+A154.00,Tuberculous mastoiditis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '17153.0', 'Category': 'Diagnosis of tuberculosis'}"
+A15x.00,Tuberculosis of other specified bones,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '37886.0', 'Category': 'Diagnosis of tuberculosis'}"
+A15y.00,Tuberculosis of other specified joint,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '42201.0', 'Category': 'Diagnosis of tuberculosis'}"
+A15z.00,Tuberculosis of bones or joints NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '44128.0', 'Category': 'Diagnosis of tuberculosis'}"
+A16..00,Tuberculosis of genitourinary system,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '37422.0', 'Category': 'Diagnosis of tuberculosis'}"
+A160.00,Tuberculosis of kidney,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '3303.0', 'Category': 'Diagnosis of tuberculosis'}"
+A160.11,Renal tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '23940.0', 'Category': 'Diagnosis of tuberculosis'}"
+A160000,Tuberculous nephropathy,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '52272.0', 'Category': 'Diagnosis of tuberculosis'}"
+A160100,Tuberculous pyelitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '50837.0', 'Category': 'Diagnosis of tuberculosis'}"
+A160200,Tuberculous pyelonephritis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '49235.0', 'Category': 'Diagnosis of tuberculosis'}"
+A160z00,Tuberculosis of kidney NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '67292.0', 'Category': 'Diagnosis of tuberculosis'}"
+A161.00,Tuberculosis of bladder,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '3830.0', 'Category': 'Diagnosis of tuberculosis'}"
+A162.00,Tuberculosis of ureter,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '53548.0', 'Category': 'Diagnosis of tuberculosis'}"
+A163.00,Tuberculosis of other urinary organs,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '34657.0', 'Category': 'Diagnosis of tuberculosis'}"
+A164.00,Tuberculosis of epididymis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '27399.0', 'Category': 'Diagnosis of tuberculosis'}"
+A165.00,Tuberculosis of other male genital organs,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '68821.0', 'Category': 'Diagnosis of tuberculosis'}"
+A165000,Tuberculosis of prostate,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '60040.0', 'Category': 'Diagnosis of tuberculosis'}"
+A165100,Tuberculosis seminal vesicle,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '49481.0', 'Category': 'Diagnosis of tuberculosis'}"
+A165200,Tuberculosis of testis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '30945.0', 'Category': 'Diagnosis of tuberculosis'}"
+A165z00,Tuberculosis of other male genital organs NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '69154.0', 'Category': 'Diagnosis of tuberculosis'}"
+A166.00,Tuberculous oophoritis or salpingitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '57466.0', 'Category': 'Diagnosis of tuberculosis'}"
+A166000,Tuberculous oophoritis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '72743.0', 'Category': 'Diagnosis of tuberculosis'}"
+A166100,Tuberculous salpingitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '38920.0', 'Category': 'Diagnosis of tuberculosis'}"
+A166111,Fallopian tube tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '31349.0', 'Category': 'Diagnosis of tuberculosis'}"
+A166z00,Tuberculous oophoritis or salpingitis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '63796.0', 'Category': 'Diagnosis of tuberculosis'}"
+A167.00,Tuberculosis of other female genital organs,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '66584.0', 'Category': 'Diagnosis of tuberculosis'}"
+A167000,Tuberculous cervicitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '49112.0', 'Category': 'Diagnosis of tuberculosis'}"
+A167100,Tuberculous endometritis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '12448.0', 'Category': 'Diagnosis of tuberculosis'}"
+A167z00,Tuberculosis of other female genital organs NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '68973.0', 'Category': 'Diagnosis of tuberculosis'}"
+A168.00,Tuberculosis of urinary tract,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '50489.0', 'Category': 'Diagnosis of tuberculosis'}"
+A16z.00,Genitourinary tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '50261.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17..00,Tuberculosis of other organs,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '55835.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170.00,Tuberculosis of skin and subcutaneous tissue,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '47881.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170.11,Lupus - tuberculous,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46675.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170000,Tuberculosis - lupus exedens,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '67637.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170100,Tuberculosis - lupus vulgaris,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '16367.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170200,Tuberculosis - scrofuloderma,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '47430.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170300,Tuberculosis - lupus NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '37492.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170500,Tuberculosis cutis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '63351.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170600,Tuberculosis lichenoides,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '4621.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170700,Tuberculosis papulonecrotica,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '62033.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170800,Tuberculosis verrucosa cutis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '31445.0', 'Category': 'Diagnosis of tuberculosis'}"
+A170z00,Tuberculosis of skin and subcutaneous tissue NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '30687.0', 'Category': 'Diagnosis of tuberculosis'}"
+A171.00,Tuberculosis with erythema nodosum hypersensitivity reaction,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '44573.0', 'Category': 'Diagnosis of tuberculosis'}"
+A171000,Bazin's disease - erythema induratum - TB hypersensitivity,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '23962.0', 'Category': 'Diagnosis of tuberculosis'}"
+A171100,Tuberculous erythema nodosum,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '34640.0', 'Category': 'Diagnosis of tuberculosis'}"
+A171z00,Erythema nodosum with tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '56833.0', 'Category': 'Diagnosis of tuberculosis'}"
+A172.00,Tuberculosis of peripheral lymph nodes,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '4256.0', 'Category': 'Diagnosis of tuberculosis'}"
+A172000,Tuberculous - cervical lymphadenitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '3720.0', 'Category': 'Diagnosis of tuberculosis'}"
+A172011,Scrofula - tuberculous cervical lymph nodes,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '40522.0', 'Category': 'Diagnosis of tuberculosis'}"
+A172100,Scrofulous tuberculous abscess,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '51110.0', 'Category': 'Diagnosis of tuberculosis'}"
+A172200,Tuberculous adenitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '5101.0', 'Category': 'Diagnosis of tuberculosis'}"
+A172z00,Tuberculosis of peripheral lymph nodes NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '26344.0', 'Category': 'Diagnosis of tuberculosis'}"
+A173.00,Tuberculosis of eye,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '43976.0', 'Category': 'Diagnosis of tuberculosis'}"
+A173000,Tuberculous chorioretinitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '37329.0', 'Category': 'Diagnosis of tuberculosis'}"
+A173100,Tuberculous episcleritis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '19652.0', 'Category': 'Diagnosis of tuberculosis'}"
+A173200,Tuberculous interstitial keratitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '55629.0', 'Category': 'Diagnosis of tuberculosis'}"
+A173300,Tuberculous chronic iridocyclitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '38342.0', 'Category': 'Diagnosis of tuberculosis'}"
+A173400,Tuberculous keratoconjunctivitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '30358.0', 'Category': 'Diagnosis of tuberculosis'}"
+A173z00,Tuberculosis of eye NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '70491.0', 'Category': 'Diagnosis of tuberculosis'}"
+A174.00,Tuberculosis of ear,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '58673.0', 'Category': 'Diagnosis of tuberculosis'}"
+A175.00,Tuberculosis of thyroid gland,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '73590.0', 'Category': 'Diagnosis of tuberculosis'}"
+A176.00,Tuberculosis of adrenal glands - Addison's disease,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '35760.0', 'Category': 'Diagnosis of tuberculosis'}"
+A177.00,Tuberculosis spleen,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '66976.0', 'Category': 'Diagnosis of tuberculosis'}"
+A178.00,Tuberculosis oesophagus,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '56670.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17y.00,Tuberculosis of other specified organs,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46727.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17y000,Tuberculosis endocardium,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '96668.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17y100,Tuberculosis myocardium,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '50869.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17y200,Tuberculosis pericardium,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '40231.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17y300,Tuberculosis of stomach,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46019.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17y400,Tuberculosis of liver,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46147.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17yz00,Tuberculosis of other specified organs NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '46383.0', 'Category': 'Diagnosis of tuberculosis'}"
+A17z.00,Tuberculosis of other organs NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '45932.0', 'Category': 'Diagnosis of tuberculosis'}"
+A18..00,Miliary tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '16414.0', 'Category': 'Diagnosis of tuberculosis'}"
+A180.00,Acute miliary tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '72008.0', 'Category': 'Diagnosis of tuberculosis'}"
+A180000,Acute miliary tuberculosis of a single specified site,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '31844.0', 'Category': 'Diagnosis of tuberculosis'}"
+A180100,Acute miliary tuberculosis of multiple sites,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '42479.0', 'Category': 'Diagnosis of tuberculosis'}"
+A18y.00,Other specified miliary tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '32459.0', 'Category': 'Diagnosis of tuberculosis'}"
+A18z.00,Miliary tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '53331.0', 'Category': 'Diagnosis of tuberculosis'}"
+A1y..00,Other specified tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '34430.0', 'Category': 'Diagnosis of tuberculosis'}"
+A1z..00,Tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '15158.0', 'Category': 'Diagnosis of tuberculosis'}"
+AE0..00,Late effects of tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '29395.0', 'Category': 'Diagnosis of tuberculosis'}"
+AE00.00,Late effects of respiratory tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '65464.0', 'Category': 'Diagnosis of tuberculosis'}"
+AE01.00,Late effects of central nervous system tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '73273.0', 'Category': 'Diagnosis of tuberculosis'}"
+AE02.00,Late effects of genitourinary system tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '40990.0', 'Category': 'Diagnosis of tuberculosis'}"
+AE03.00,Late effects of tuberculosis of bones and joints,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '73549.0', 'Category': 'Diagnosis of tuberculosis'}"
+AE04.00,Late effects of tuberculosis of other specified organs,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '70911.0', 'Category': 'Diagnosis of tuberculosis'}"
+AE0z.00,Late effects of tuberculosis NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '61442.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1.00,[X]Tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '73149.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1000,"[X]Other resp tubercul,confirmd bacteriologicly+histologicly",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '73185.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1100,"[X]Resp tuberculos unspcfd,confirmd bacteriolog+histologicly",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '73225.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1300,"[X]Resp TB unspcf,w'out mention/bacterial or histol confrmtn",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '55298.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1400,[X]Other tuberculosis of nervous system,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '106837.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1600,[X]Tuberculosis of other specified organs,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '72680.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1800,[X]Other miliary tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '106521.0', 'Category': 'Diagnosis of tuberculosis'}"
+Ayu1900,"[X]Miliary tuberculosis, unspecified",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '97922.0', 'Category': 'Diagnosis of tuberculosis'}"
+AyuJ200,[X]Sequelae of tuberculosis of bones and joints,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '106978.0', 'Category': 'History of tuberculosis'}"
+AyuJ400,[X]Sequelae of respiratory and unspecified tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '93768.0', 'Category': 'History of tuberculosis'}"
+F004.00,Meningitis - tuberculous,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '11976.0', 'Category': 'Diagnosis of tuberculosis'}"
+F033300,Encephalitis due to tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '99925.0', 'Category': 'Diagnosis of tuberculosis'}"
+F033311,Tuberculous encephalitis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '97778.0', 'Category': 'Diagnosis of tuberculosis'}"
+F040600,Tuberculous intracranial abscess,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '54908.0', 'Category': 'Diagnosis of tuberculosis'}"
+F041300,Tuberculous intraspinal abscess,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '105288.0', 'Category': 'Diagnosis of tuberculosis'}"
+F4A5500,Keratitis due to tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '94249.0', 'Category': 'Diagnosis of tuberculosis'}"
+G500300,Acute pericarditis - tuberculous,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '57126.0', 'Category': 'Diagnosis of tuberculosis'}"
+G500311,TB - acute pericarditis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '16996.0', 'Category': 'Diagnosis of tuberculosis'}"
+G520600,Acute myocarditis - tuberculous,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '91847.0', 'Category': 'Diagnosis of tuberculosis'}"
+H450.00,Pneumoconiosis associated with tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '63172.0', 'Category': 'History of tuberculosis'}"
+J550200,Peritonitis - tuberculous,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '32899.0', 'Category': 'Diagnosis of tuberculosis'}"
+K154800,Cystitis in tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '56771.0', 'Category': 'Diagnosis of tuberculosis'}"
+K214300,Prostatitis in tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '109312.0', 'Category': 'Diagnosis of tuberculosis'}"
+K43..00,Female tuberculous pelvic inflammatory disease,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '27611.0', 'Category': 'Diagnosis of tuberculosis'}"
+N018.00,Tuberculous arthritis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '97588.0', 'Category': 'Diagnosis of tuberculosis'}"
+N304.00,Tuberculosis of spine (Pott's),Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '43370.0', 'Category': 'Diagnosis of tuberculosis'}"
+N304.11,Tuberculosis of spine,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '6553.0', 'Category': 'Diagnosis of tuberculosis'}"
+N304000,Tuberculosis of cervical spine,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '70293.0', 'Category': 'Diagnosis of tuberculosis'}"
+N304100,Tuberculosis of thoracic spine,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '67337.0', 'Category': 'Diagnosis of tuberculosis'}"
+N304200,Tuberculosis of lumbar spine,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '65994.0', 'Category': 'Diagnosis of tuberculosis'}"
+N304300,Tuberculosis of sacrum/coccyx,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '97325.0', 'Category': 'Diagnosis of tuberculosis'}"
+N305.00,Tuberculosis of limb bones,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '24372.0', 'Category': 'Diagnosis of tuberculosis'}"
+N305000,Tuberculosis of unspecified limb bone,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '99914.0', 'Category': 'Diagnosis of tuberculosis'}"
+N305100,Tuberculosis of the upper arm bone,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '62963.0', 'Category': 'Diagnosis of tuberculosis'}"
+N305200,Tuberculosis of the forearm bone,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '68154.0', 'Category': 'Diagnosis of tuberculosis'}"
+N305300,Tuberculosis of the pelvic and thigh bones,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '59916.0', 'Category': 'Diagnosis of tuberculosis'}"
+N305400,Tuberculosis of the lower leg bone,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '57587.0', 'Category': 'Diagnosis of tuberculosis'}"
+N305500,Tuberculosis of other limb bones,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '95332.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306.00,Tuberculosis of other bones,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '12338.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306000,"Tuberculosis of bone, site unspecified",Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '99305.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306100,Tuberculosis of the bones of the shoulder region,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '53864.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306200,Tuberculosis of the bones of the hand,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '99783.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306300,Tuberculosis of the bones of the ankle and foot,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '67601.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306400,Tuberculosis of the bones of other sites,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '71138.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306500,Tuberculosis of the bones of multiple sites,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '99593.0', 'Category': 'Diagnosis of tuberculosis'}"
+N306z00,Tuberculosis of bone NOS,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '70862.0', 'Category': 'Diagnosis of tuberculosis'}"
+Q402400,Congenital tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '55957.0', 'Category': 'Diagnosis of tuberculosis'}"
+ZV12A00,[V] Personal history of pulmonary tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '18206.0', 'Category': 'History of tuberculosis'}"
+ZV12B00,[V] Personal history of tuberculosis,Read codes v2,C924,2987,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Medcode': '9158.0', 'Category': 'History of tuberculosis'}"
+100469,History of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'History of tuberculosis drug therapy', 'Readcode': '14P9.00'}"
+102673,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Isoniazid resistant tuberculosis', 'Readcode': '65Y5.00'}"
+105288,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous intraspinal abscess', 'Readcode': 'F041300'}"
+106521,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Other miliary tuberculosis', 'Readcode': 'Ayu1800'}"
+106837,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Other tuberculosis of nervous system', 'Readcode': 'Ayu1400'}"
+106978,History of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Sequelae of tuberculosis of bones and joints', 'Readcode': 'AyuJ200'}"
+109312,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Prostatitis in tuberculosis', 'Readcode': 'K214300'}"
+11975,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous meningitis', 'Readcode': 'A130.00'}"
+11976,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Meningitis - tuberculous', 'Readcode': 'F004.00'}"
+12338,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other bones', 'Readcode': 'N306.00'}"
+12448,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous endometritis', 'Readcode': 'A167100'}"
+14913,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous hydrothorax', 'Readcode': 'A120200'}"
+15158,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis NOS', 'Readcode': 'A1z..00'}"
+15693,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous bronchiectasis', 'Readcode': 'A115.00'}"
+16265,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Primary tuberculous complex', 'Readcode': 'A100.00'}"
+16331,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of lung with cavitation', 'Readcode': 'A112.00'}"
+16367,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis - lupus vulgaris', 'Readcode': 'A170100'}"
+16414,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Miliary tuberculosis', 'Readcode': 'A18..00'}"
+16582,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'TB - tuberculosis notification', 'Readcode': '65V9.11'}"
+16741,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous fibrosis of lung', 'Readcode': 'A114.00'}"
+16996,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'TB - acute pericarditis', 'Readcode': 'G500311'}"
+17153,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous mastoiditis', 'Readcode': 'A154.00'}"
+18206,History of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[V] Personal history of pulmonary tuberculosis', 'Readcode': 'ZV12A00'}"
+1840,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis', 'Readcode': 'A1...00'}"
+18950,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other specified pulmonary tuberculosis', 'Readcode': 'A11y.00'}"
+19652,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous episcleritis', 'Readcode': 'A173100'}"
+20333,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous laryngitis', 'Readcode': 'A123.00'}"
+2193,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of intestines, peritoneum and mesenteric glands', 'Readcode': 'A14..00'}"
+22011,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Primary tuberculous infection', 'Readcode': 'A10..00'}"
+2208,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of hip', 'Readcode': 'A151.00'}"
+22572,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous osteomylelytis', 'Readcode': 'A15..11'}"
+23451,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of knee', 'Readcode': 'A152.00'}"
+23472,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pleurisy', 'Readcode': 'A120.00'}"
+23940,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Renal tuberculosis', 'Readcode': 'A160.11'}"
+23962,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""Bazin's disease - erythema induratum - TB hypersensitivity"", 'Readcode': 'A171000'}"
+24372,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of limb bones', 'Readcode': 'N305.00'}"
+24413,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'TB lung confirm sputum microscopy with or without culture', 'Readcode': 'A124000'}"
+24517,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Primary respiratory TB confirm bact and histologically', 'Readcode': 'A124700'}"
+24626,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous arthritis', 'Readcode': 'A15..12'}"
+26344,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of peripheral lymph nodes NOS', 'Readcode': 'A172z00'}"
+27399,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of epididymis', 'Readcode': 'A164.00'}"
+27611,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Female tuberculous pelvic inflammatory disease', 'Readcode': 'K43..00'}"
+29395,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Late effects of tuberculosis', 'Readcode': 'AE0..00'}"
+29482,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of mesenteric lymph glands', 'Readcode': 'A14y300'}"
+30358,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous keratoconjunctivitis', 'Readcode': 'A173400'}"
+30687,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of skin and subcutaneous tissue NOS', 'Readcode': 'A170z00'}"
+30945,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of testis', 'Readcode': 'A165200'}"
+31349,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Fallopian tube tuberculosis', 'Readcode': 'A166111'}"
+31409,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous peritonitis', 'Readcode': 'A140.00'}"
+31436,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of small intestine', 'Readcode': 'A14y200'}"
+31445,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis verrucosa cutis', 'Readcode': 'A170800'}"
+31670,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Resp TB bacteriologically and histologically confirmed', 'Readcode': 'A124.00'}"
+31680,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous myelitis', 'Readcode': 'A136100'}"
+31844,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Acute miliary tuberculosis of a single specified site', 'Readcode': 'A180000'}"
+32180,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Notification of tuberculosis', 'Readcode': '65V9.00'}"
+32459,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other specified miliary tuberculosis', 'Readcode': 'A18y.00'}"
+3273,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""Tuberculosis of vertebral column - Pott's"", 'Readcode': 'A150.00'}"
+32899,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Peritonitis - tuberculous', 'Readcode': 'J550200'}"
+3303,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of kidney', 'Readcode': 'A160.00'}"
+33372,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other gastrointestinal tract tuberculosis NOS', 'Readcode': 'A14yz00'}"
+34430,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other specified tuberculosis', 'Readcode': 'A1y..00'}"
+34640,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous erythema nodosum', 'Readcode': 'A171100'}"
+34657,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other urinary organs', 'Readcode': 'A163.00'}"
+35443,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pleurisy, conf bacteriologically/histologically', 'Readcode': 'A124600'}"
+35760,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""Tuberculosis of adrenal glands - Addison's disease"", 'Readcode': 'A176.00'}"
+3596,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of bones and joints', 'Readcode': 'A15..00'}"
+3720,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous - cervical lymphadenitis', 'Readcode': 'A172000'}"
+37329,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous chorioretinitis', 'Readcode': 'A173000'}"
+37422,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of genitourinary system', 'Readcode': 'A16..00'}"
+37492,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis - lupus NOS', 'Readcode': 'A170300'}"
+37598,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of mediastinum', 'Readcode': 'A12y000'}"
+37694,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Primary tuberculous infection NOS', 'Readcode': 'A10z.00'}"
+37834,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of pleura', 'Readcode': 'A120000'}"
+37886,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other specified bones', 'Readcode': 'A15x.00'}"
+38110,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Pulmonary tuberculosis NOS', 'Readcode': 'A11z.00'}"
+3830,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of bladder', 'Readcode': 'A161.00'}"
+38342,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous chronic iridocyclitis', 'Readcode': 'A173300'}"
+38920,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous salpingitis', 'Readcode': 'A166100'}"
+39279,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of large intestine', 'Readcode': 'A14y100'}"
+39512,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous empyema', 'Readcode': 'A120100'}"
+40231,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis pericardium', 'Readcode': 'A17y200'}"
+40522,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Scrofula - tuberculous cervical lymph nodes', 'Readcode': 'A172011'}"
+40605,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Prim respiratory TB without mention of bact or hist confirm', 'Readcode': 'A125200'}"
+40990,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Late effects of genitourinary system tuberculosis', 'Readcode': 'AE02.00'}"
+41051,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis lung bact and histological examin not done', 'Readcode': 'A125100'}"
+41208,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of meninges and central nervous system', 'Readcode': 'A13..00'}"
+41383,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other specified tuberculosis of central nervous system', 'Readcode': 'A13y.00'}"
+42201,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other specified joint', 'Readcode': 'A15y.00'}"
+4247,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'TB chemotherapy', 'Readcode': '8BAD100'}"
+42479,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Acute miliary tuberculosis of multiple sites', 'Readcode': 'A180100'}"
+4256,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of peripheral lymph nodes', 'Readcode': 'A172.00'}"
+42630,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other primary progressive tuberculosis', 'Readcode': 'A10y.00'}"
+43370,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""Tuberculosis of spine (Pott's)"", 'Readcode': 'N304.00'}"
+43791,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous meningoencephalitis', 'Readcode': 'A130300'}"
+43976,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of eye', 'Readcode': 'A173.00'}"
+44039,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""Tuberculosis of larynx, trachea & bronchus conf bact/hist'y"", 'Readcode': 'A124500'}"
+44128,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of bones or joints NOS', 'Readcode': 'A15z.00'}"
+44129,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of mediastinal lymph nodes', 'Readcode': 'A121100'}"
+44573,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis with erythema nodosum hypersensitivity reaction', 'Readcode': 'A171.00'}"
+44655,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'TB intrathoracic lymph nodes confirm bact histologically', 'Readcode': 'A124400'}"
+45318,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous synovitis', 'Readcode': 'A15..13'}"
+45861,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of nasal sinus', 'Readcode': 'A12y300'}"
+45932,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other organs NOS', 'Readcode': 'A17z.00'}"
+46019,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of stomach', 'Readcode': 'A17y300'}"
+46039,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculoma of spinal cord', 'Readcode': 'A134.00'}"
+46044,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous abscess of spinal cord', 'Readcode': 'A135.00'}"
+46147,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of liver', 'Readcode': 'A17y400'}"
+4621,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis lichenoides', 'Readcode': 'A170600'}"
+46272,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pleurisy in primary progressive tuberculosis', 'Readcode': 'A101.00'}"
+46383,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other specified organs NOS', 'Readcode': 'A17yz00'}"
+46675,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Lupus - tuberculous', 'Readcode': 'A170.11'}"
+46727,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other specified organs', 'Readcode': 'A17y.00'}"
+46802,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of spinal meninges', 'Readcode': 'A130100'}"
+46926,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of intrathoracic lymph nodes NOS', 'Readcode': 'A121z00'}"
+47016,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'On tuberculosis chemoprophylaxis', 'Readcode': '65Y1.00'}"
+47336,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Lung tuberculosis', 'Readcode': 'A11..11'}"
+47430,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis - scrofuloderma', 'Readcode': 'A170200'}"
+47832,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""Tuberculosis of lung, bacteriologically & histolog'y neg"", 'Readcode': 'A125000'}"
+47881,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of skin and subcutaneous tissue', 'Readcode': 'A170.00'}"
+48580,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Nodular lung tuberculosis', 'Readcode': 'A111.00'}"
+4907,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis limb bones - Tuberculous dactylitis', 'Readcode': 'A153.00'}"
+49112,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous cervicitis', 'Readcode': 'A167000'}"
+49235,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pyelonephritis', 'Readcode': 'A160200'}"
+49433,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of retroperitoneal lymph nodes', 'Readcode': 'A14y500'}"
+49481,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis seminal vesicle', 'Readcode': 'A165100'}"
+49503,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of tracheobronchial lymph nodes', 'Readcode': 'A121200'}"
+50147,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other specified respiratory tuberculosis NOS', 'Readcode': 'A12yz00'}"
+50261,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Genitourinary tuberculosis NOS', 'Readcode': 'A16z.00'}"
+50489,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of urinary tract', 'Readcode': 'A168.00'}"
+50837,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pyelitis', 'Readcode': 'A160100'}"
+50869,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis myocardium', 'Readcode': 'A17y100'}"
+50902,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other specified respiratory tuberculosis', 'Readcode': 'A12y.00'}"
+5101,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous adenitis', 'Readcode': 'A172200'}"
+51110,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Scrofulous tuberculous abscess', 'Readcode': 'A172100'}"
+5145,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of hilar lymph nodes', 'Readcode': 'A121000'}"
+52199,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculoma of brain', 'Readcode': 'A132.00'}"
+52272,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous nephropathy', 'Readcode': 'A160000'}"
+5319,History of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'H/O: tuberculosis', 'Readcode': '1411.00'}"
+53331,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Miliary tuberculosis NOS', 'Readcode': 'A18z.00'}"
+53473,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Isolated tracheal or bronchial tuberculosis NOS', 'Readcode': 'A122z00'}"
+53548,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of ureter', 'Readcode': 'A162.00'}"
+53701,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Infiltrative lung tuberculosis', 'Readcode': 'A110.00'}"
+53864,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the bones of the shoulder region', 'Readcode': 'N306100'}"
+54570,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other gastrointestinal tract tuberculosis', 'Readcode': 'A14y.00'}"
+54579,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of gastrointestinal tract NOS', 'Readcode': 'A14z.00'}"
+54840,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of cerebral meninges', 'Readcode': 'A130000'}"
+54908,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous intracranial abscess', 'Readcode': 'F040600'}"
+55298,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""[X]Resp TB unspcf,w'out mention/bacterial or histol confrmtn"", 'Readcode': 'Ayu1300'}"
+55629,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous interstitial keratitis', 'Readcode': 'A173200'}"
+55835,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other organs', 'Readcode': 'A17..00'}"
+55957,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Congenital tuberculosis', 'Readcode': 'Q402400'}"
+56670,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis oesophagus', 'Readcode': 'A178.00'}"
+56771,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Cystitis in tuberculosis', 'Readcode': 'K154800'}"
+56833,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Erythema nodosum with tuberculosis NOS', 'Readcode': 'A171z00'}"
+56890,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pleurisy NOS', 'Readcode': 'A120z00'}"
+57126,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Acute pericarditis - tuberculous', 'Readcode': 'G500300'}"
+57398,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous abscess of brain', 'Readcode': 'A133.00'}"
+57417,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculoma of meninges', 'Readcode': 'A131.00'}"
+57466,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous oophoritis or salpingitis', 'Readcode': 'A166.00'}"
+57587,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the lower leg bone', 'Readcode': 'N305400'}"
+58588,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of lung, confirmed by unspecified means', 'Readcode': 'A124300'}"
+58673,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of ear', 'Readcode': 'A174.00'}"
+58827,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of intrathoracic lymph nodes', 'Readcode': 'A121.00'}"
+59087,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of rectum', 'Readcode': 'A14y400'}"
+59202,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous encephalitis or myelitis', 'Readcode': 'A136.00'}"
+59916,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the pelvic and thigh bones', 'Readcode': 'N305300'}"
+60040,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of prostate', 'Readcode': 'A165000'}"
+61442,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Late effects of tuberculosis NOS', 'Readcode': 'AE0z.00'}"
+62033,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis papulonecrotica', 'Readcode': 'A170700'}"
+62468,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of bronchus', 'Readcode': 'A113.00'}"
+62530,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of lung, confirmed histologically', 'Readcode': 'A124200'}"
+62963,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the upper arm bone', 'Readcode': 'N305100'}"
+63172,History of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Pneumoconiosis associated with tuberculosis', 'Readcode': 'H450.00'}"
+63351,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis cutis', 'Readcode': 'A170500'}"
+635,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Pulmonary tuberculosis', 'Readcode': 'A11..00'}"
+63796,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous oophoritis or salpingitis NOS', 'Readcode': 'A166z00'}"
+63959,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Other respiratory tuberculosis', 'Readcode': 'A12..00'}"
+65464,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Late effects of respiratory tuberculosis', 'Readcode': 'AE00.00'}"
+6553,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of spine', 'Readcode': 'N304.11'}"
+65994,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of lumbar spine', 'Readcode': 'N304200'}"
+66441,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pneumothorax', 'Readcode': 'A117.00'}"
+66584,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other female genital organs', 'Readcode': 'A167.00'}"
+66976,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis spleen', 'Readcode': 'A177.00'}"
+67292,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of kidney NOS', 'Readcode': 'A160z00'}"
+67337,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of thoracic spine', 'Readcode': 'N304100'}"
+67601,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the bones of the ankle and foot', 'Readcode': 'N306300'}"
+67637,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis - lupus exedens', 'Readcode': 'A170000'}"
+68154,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the forearm bone', 'Readcode': 'N305200'}"
+68821,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other male genital organs', 'Readcode': 'A165.00'}"
+68973,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other female genital organs NOS', 'Readcode': 'A167z00'}"
+69154,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other male genital organs NOS', 'Readcode': 'A165z00'}"
+69260,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Isolated tracheal or bronchial tuberculosis', 'Readcode': 'A122.00'}"
+69322,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous meningitis NOS', 'Readcode': 'A130z00'}"
+69471,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': ""Resp TB unspcf,w'out mention/bacterial or histol confrmtn"", 'Readcode': 'A125X00'}"
+70140,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of central nervous system NOS', 'Readcode': 'A13z.00'}"
+70293,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of cervical spine', 'Readcode': 'N304000'}"
+70491,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of eye NOS', 'Readcode': 'A173z00'}"
+70862,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of bone NOS', 'Readcode': 'N306z00'}"
+70911,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Late effects of tuberculosis of other specified organs', 'Readcode': 'AE04.00'}"
+71138,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the bones of other sites', 'Readcode': 'N306400'}"
+7133,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Respiratory TB not confirmed bact or histologically', 'Readcode': 'A125.00'}"
+72008,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Acute miliary tuberculosis', 'Readcode': 'A180.00'}"
+72072,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous encephalitis or myelitis NOS', 'Readcode': 'A136z00'}"
+72402,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of nasopharynx', 'Readcode': 'A12y100'}"
+72680,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Tuberculosis of other specified organs', 'Readcode': 'Ayu1600'}"
+72743,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous oophoritis', 'Readcode': 'A166000'}"
+73149,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Tuberculosis', 'Readcode': 'Ayu1.00'}"
+73185,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Other resp tubercul,confirmd bacteriologicly+histologicly', 'Readcode': 'Ayu1000'}"
+73225,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Resp tuberculos unspcfd,confirmd bacteriolog+histologicly', 'Readcode': 'Ayu1100'}"
+73273,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Late effects of central nervous system tuberculosis', 'Readcode': 'AE01.00'}"
+73549,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Late effects of tuberculosis of bones and joints', 'Readcode': 'AE03.00'}"
+73590,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of thyroid gland', 'Readcode': 'A175.00'}"
+9158,History of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[V] Personal history of tuberculosis', 'Readcode': 'ZV12B00'}"
+91666,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Streptomycin resistant tuberculosis', 'Readcode': '65Y2.00'}"
+91847,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Acute myocarditis - tuberculous', 'Readcode': 'G520600'}"
+93015,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Isolated tracheal tuberculosis', 'Readcode': 'A122000'}"
+93071,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of lung, confirmed by culture only', 'Readcode': 'A124100'}"
+93360,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous encephalitis', 'Readcode': 'A136000'}"
+93768,History of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Sequelae of respiratory and unspecified tuberculosis', 'Readcode': 'AyuJ400'}"
+93948,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Isolated bronchial tuberculosis', 'Readcode': 'A122100'}"
+94249,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Keratitis due to tuberculosis', 'Readcode': 'F4A5500'}"
+95332,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of other limb bones', 'Readcode': 'N305500'}"
+95913,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Latent tuberculosis', 'Readcode': '65Y9.11'}"
+96477,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Inactive tuberculosis', 'Readcode': '65Y9.00'}"
+96668,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis endocardium', 'Readcode': 'A17y000'}"
+97325,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of sacrum/coccyx', 'Readcode': 'N304300'}"
+97525,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Ciprofloxacin resistant tuberculosis', 'Readcode': '65Y8.00'}"
+97588,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous arthritis', 'Readcode': 'N018.00'}"
+97658,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of nasal septum', 'Readcode': 'A12y200'}"
+97778,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous encephalitis', 'Readcode': 'F033311'}"
+97922,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': '[X]Miliary tuberculosis, unspecified', 'Readcode': 'Ayu1900'}"
+99305,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of bone, site unspecified', 'Readcode': 'N306000'}"
+9953,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculous pneumonia', 'Readcode': 'A116.00'}"
+99593,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the bones of multiple sites', 'Readcode': 'N306500'}"
+99783,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of the bones of the hand', 'Readcode': 'N306200'}"
+99914,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Tuberculosis of unspecified limb bone', 'Readcode': 'N305000'}"
+99925,Diagnosis of tuberculosis,Med codes,C925,2989,Tuberculosis - Primary care,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'ReadcodeDescr': 'Encephalitis due to tuberculosis', 'Readcode': 'F033300'}"
+A15,"Respiratory tuberculosis, bacteriologically and histologically confirmed",ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+A16,"Respiratory tuberculosis, not confirmed bacteriologically or histologically",ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+A17,Tuberculosis of nervous system,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+A18,Tuberculosis of other organs,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+A19,Miliary tuberculosis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+B20.0,HIV disease resulting in mycobacterial infection,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+B90,Sequelae of tuberculosis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+J65,Pneumoconiosis associated with tuberculosis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+K23.0,Tuberculous oesophagitis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+K67.3,Tuberculous peritonitis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+K93.0,"Tuberculous disorders of intestines, peritoneum and mesenteric glands",ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+M01.1,Tuberculous arthritis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+M49.0,Tuberculosis of spine,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+M90.0,Tuberculosis of bone,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+N33.0,Tuberculous cystitis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+N74.0,Tuberculous infection of cervix uteri,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+N74.1,Female tuberculous pelvic inflammatory disease,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
+P37.0,Congenital tuberculosis,ICD10 codes,C926,2991,Tuberculosis - Secondary care - Diagnoses,PH87,174,Tuberculosis,"{'Disease': 'Tuberculosis', 'Category': 'Diagnosis of Tuberculosis'}"
\ No newline at end of file
diff --git a/example/clinical-codes-org/Urinary tract stones/Where this code list comes from .docx b/example/clinical-codes-org/Urinary tract stones/Where this code list comes from .docx
new file mode 100644
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GIT binary patch
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z@7p_PvA-sV-_K7wVHvThe&XL*3MbyVn^&<hF#P||%z&CDXNK0XvM@3*JY-^E;AZ&D
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HcmV?d00001

diff --git a/example/clinical-codes-org/Urinary tract stones/phenotype_PH331_ver_662_concepts_20230719T121545.csv b/example/clinical-codes-org/Urinary tract stones/phenotype_PH331_ver_662_concepts_20230719T121545.csv
new file mode 100644
index 0000000..7044253
--- /dev/null
+++ b/example/clinical-codes-org/Urinary tract stones/phenotype_PH331_ver_662_concepts_20230719T121545.csv	
@@ -0,0 +1,270 @@
+code,description,coding_system,concept_id,concept_version_id,concept_name,phenotype_id,phenotype_version_id,phenotype_name,code_attributes
+14D3.00,H/O: urinary stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '24994.0', 'Category': 'History of Urolithiasis'}"
+1A52.00,Renal colic,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '640.0', 'Category': 'Diagnosis of Urolithiasis'}"
+1A52.11,"Renal colic, symptom",Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '6770.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G4..00,O/E: renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '8399.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G4..11,O/E: kidney stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '6979.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G41.00,O/E: oxalate renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '34584.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G42.00,O/E: phosphate -staghorn-stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '24165.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G42.11,Phosphate kidney stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '32858.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G43.00,O/E: uric acid renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '27786.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G44.00,O/E: cystine renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '49783.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G4Z.00,O/E: renal stone NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '38461.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G6..00,O/E - ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '14276.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G7..00,O/E - urethral calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '45245.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G8..00,O/E - bladder calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '6978.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G81.00,O/E - vesical oxalate calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '74021.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G81.11,Oxalate bladder stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '31773.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G82.00,O/E-vesical uric acid calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '93608.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G82.11,Uric acid bladder stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '29242.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G83.00,O/E-vesical phosphate calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '102293.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G83.11,Phosphate bladder stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '65920.0', 'Category': 'Diagnosis of Urolithiasis'}"
+4G8Z.00,O/E - bladder calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '64699.0', 'Category': 'Diagnosis of Urolithiasis'}"
+7B05000,Unspecified open removal of calculus from kidney,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '4139.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07.00,Percutaneous renal stone surgery,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '8190.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07.11,Nephroscopic percutaneous lithotripsy of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '56462.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07.12,Percutaneous lithotripsy of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '2315.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07000,Nephroscopy and ultrasound lithotripsy of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '41619.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07011,Endoscopic ultrasound fragmentation of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '36157.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07100,Nephroscopy & electrohydraulic lithotripsy of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '60234.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07200,Nephroscopy and laser lithotripsy of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '43350.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07211,Endoscopic laser fragmentation of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '8677.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07400,Endoscopic extraction of calculus of kidney nec,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '34139.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07y00,Other specified percutaneous renal stone surgery,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '66743.0', 'Category': 'Procedure for Urolithiasis'}"
+7B07z00,Percutaneous renal stone surgery NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '7119.0', 'Category': 'Procedure for Urolithiasis'}"
+7B0B.00,Extracorporeal shockwave lithotripsy for renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '7682.0', 'Category': 'Procedure for Urolithiasis'}"
+7B0B.11,Extracorporeal fragmentation of renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '21401.0', 'Category': 'Procedure for Urolithiasis'}"
+7B0B000,ESWL for renal calculus of unspecified size,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '17685.0', 'Category': 'Procedure for Urolithiasis'}"
+7B0B100,ESWL for renal calculus less than 2 cm in diameter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '52721.0', 'Category': 'Procedure for Urolithiasis'}"
+7B0B200,ESWL for renal calculus 2 cm or more in diameter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '94219.0', 'Category': 'Procedure for Urolithiasis'}"
+7B0By00,Extracorporeal shockwave lithotripsy for renal calculus OS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '66113.0', 'Category': 'Procedure for Urolithiasis'}"
+7B0Bz00,Extracorporeal shockwave lithotripsy for renal calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '28514.0', 'Category': 'Procedure for Urolithiasis'}"
+7B17000,Nephroscopic laser lithotripsy of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '39511.0', 'Category': 'Procedure for Urolithiasis'}"
+7B17011,Nephroscopic laser fragmentation of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '58004.0', 'Category': 'Procedure for Urolithiasis'}"
+7B17100,Other nephroscopic fragmentation of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '23897.0', 'Category': 'Procedure for Urolithiasis'}"
+7B17111,Other nephroscopic lithotripsy of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '20813.0', 'Category': 'Procedure for Urolithiasis'}"
+7B17200,Nephroscopic extraction of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '45673.0', 'Category': 'Procedure for Urolithiasis'}"
+7B18.00,Ureteroscopic operations for ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '5366.0', 'Category': 'Procedure for Urolithiasis'}"
+7B18000,Ureteroscopic laser lithotripsy of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '36792.0', 'Category': 'Procedure for Urolithiasis'}"
+7B18011,Ureteroscopic laser fragmentation of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '28790.0', 'Category': 'Procedure for Urolithiasis'}"
+7B18100,Other ureteroscopic fragmentation of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '16025.0', 'Category': 'Procedure for Urolithiasis'}"
+7B18200,Ureteroscopic extraction of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '38804.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19.00,Cystoscopic removal of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '4216.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19000,Cystoscopic laser lithotripsy of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '18190.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19100,Other cystoscopic fragmentation of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '41871.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19200,Cystoscopic extraction of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '37073.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19211,Basket extraction of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '10587.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19212,Dormia basket extraction of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '24933.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19300,Cystoscopic catheter drainage for ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '35743.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19400,Cystoscopic dilation of ureter for drainage of calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '39048.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19y00,Other specified cystoscopic removal of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '72447.0', 'Category': 'Procedure for Urolithiasis'}"
+7B19z00,Cystoscopic removal of ureteric calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '58149.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1C.00,Extracorporeal shockwave lithotripsy of ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '3449.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1C000,Extracorp shockwave lithotripsy of unspec ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '51305.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1C100,Extracorporeal shockwave therapy for stone in upper ureter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '61904.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1C200,Extracorporeal shockwave lithotripsy for stone in mid-ureter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '101583.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1C300,Extracorporeal shockwave lithotripsy stone in lower ureter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '71131.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1Cy00,Extracorporeal shockwave lithotripsy of ureteric calculus OS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '29477.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1Cz00,Extracorporeal shockwave lithotripsy ureteric calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '29464.0', 'Category': 'Procedure for Urolithiasis'}"
+7B1F000,Endoscopic extraction of calculus of urinary diversion,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '102036.0', 'Category': 'Procedure for Urolithiasis'}"
+7B25000,Open removal of bladder calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '23381.0', 'Category': 'Procedure for Urolithiasis'}"
+7B29100,Other endoscopic extraction of bladder calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '28595.0', 'Category': 'Procedure for Urolithiasis'}"
+7B29400,Electrokinetic lithotripsy of bladder calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '9323.0', 'Category': 'Procedure for Urolithiasis'}"
+7B2B400,Removal of bladder calculus by urethral catheter suction,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '40272.0', 'Category': 'Procedure for Urolithiasis'}"
+7B42300,Open urethrotomy and removal of calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '34097.0', 'Category': 'Procedure for Urolithiasis'}"
+7B42400,Open extraction of calculus from urethra,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '90777.0', 'Category': 'Procedure for Urolithiasis'}"
+7B43900,Endoscopic removal of urethral calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '28953.0', 'Category': 'Procedure for Urolithiasis'}"
+C341100,Uric acid nephrolithiasis,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '43744.0', 'Category': 'Diagnosis of Urolithiasis'}"
+C341111,Renal stone - uric acid,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '9162.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K100600,Calculous pyelonephritis,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '2939.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K112.00,Hydronephrosis with renal and ureteral calculous obstruction,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '27592.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K12..00,Calculus of kidney and ureter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '9950.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K12..11,Kidney calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '8777.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K12..12,Urinary calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '3669.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K120.00,Calculus of kidney,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '4928.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K120.11,Nephrolithiasis NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '24047.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K120.12,Renal calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '1858.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K120.13,Renal stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '2258.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K120000,Staghorn calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '10282.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K120z00,Renal calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '3906.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K121.00,Calculus of ureter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '3308.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K121.11,Ureteric calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '2410.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K121.12,Ureteric stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '6048.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K121.13,Ureterolithiasis,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '36972.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K122.00,Calculus of kidney with calculus of ureter,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '33746.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K12z.00,Urinary calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '1256.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K14..00,Lower urinary tract calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '47869.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K140.00,Bladder calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '5729.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K140.11,Bladder stone,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '1912.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K140000,Calculus in diverticulum of bladder,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '67386.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K140100,Other calculus in bladder,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '94420.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K140z00,Bladder calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '59834.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K141.00,Calculus in urethra,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '2105.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K14y.00,Other lower urinary tract calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '46291.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K14z.00,Lower urinary tract calculus NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '44648.0', 'Category': 'Diagnosis of Urolithiasis'}"
+K1A..00,Urinary calculus in schistosomiasis,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '52569.0', 'Category': 'Diagnosis of Urolithiasis'}"
+Kyu3.00,[X]Urolithiasis,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '45765.0', 'Category': 'Diagnosis of Urolithiasis'}"
+Kyu3000,[X]Other lower urinary tract calculus,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '106912.0', 'Category': 'Diagnosis of Urolithiasis'}"
+Kyu3100,[X]Calculus of urinary tract in other diseases CE,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '23917.0', 'Category': 'Diagnosis of Urolithiasis'}"
+R080.00,[D]Renal colic,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '6087.0', 'Category': 'Diagnosis of Urolithiasis'}"
+R080000,"[D]Renal colic, unspecified",Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '15201.0', 'Category': 'Diagnosis of Urolithiasis'}"
+R080100,[D]Ureteric colic,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '6147.0', 'Category': 'Diagnosis of Urolithiasis'}"
+R080z00,[D]Renal colic NOS,Read codes v2,C1637,4413,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Medcode': '33747.0', 'Category': 'Diagnosis of Urolithiasis'}"
+101583,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy for stone in mid-ureter', 'Readcode': '7B1C200'}"
+102036,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Endoscopic extraction of calculus of urinary diversion', 'Readcode': '7B1F000'}"
+102293,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E-vesical phosphate calculus', 'Readcode': '4G83.00'}"
+10282,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Staghorn calculus', 'Readcode': 'K120000'}"
+10587,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Basket extraction of ureteric calculus', 'Readcode': '7B19211'}"
+106912,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': '[X]Other lower urinary tract calculus', 'Readcode': 'Kyu3000'}"
+1256,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Urinary calculus NOS', 'Readcode': 'K12z.00'}"
+14276,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E - ureteric calculus', 'Readcode': '4G6..00'}"
+15201,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': '[D]Renal colic, unspecified', 'Readcode': 'R080000'}"
+16025,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other ureteroscopic fragmentation of ureteric calculus', 'Readcode': '7B18100'}"
+17685,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'ESWL for renal calculus of unspecified size', 'Readcode': '7B0B000'}"
+18190,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Cystoscopic laser lithotripsy of ureteric calculus', 'Readcode': '7B19000'}"
+1858,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Renal calculus', 'Readcode': 'K120.12'}"
+1912,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Bladder stone', 'Readcode': 'K140.11'}"
+20813,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other nephroscopic lithotripsy of ureteric calculus', 'Readcode': '7B17111'}"
+2105,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Calculus in urethra', 'Readcode': 'K141.00'}"
+21401,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal fragmentation of renal calculus', 'Readcode': '7B0B.11'}"
+2258,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Renal stone', 'Readcode': 'K120.13'}"
+2315,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Percutaneous lithotripsy of renal calculus', 'Readcode': '7B07.12'}"
+23381,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Open removal of bladder calculus', 'Readcode': '7B25000'}"
+23897,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other nephroscopic fragmentation of ureteric calculus', 'Readcode': '7B17100'}"
+23917,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': '[X]Calculus of urinary tract in other diseases CE', 'Readcode': 'Kyu3100'}"
+24047,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephrolithiasis NOS', 'Readcode': 'K120.11'}"
+2410,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Ureteric calculus', 'Readcode': 'K121.11'}"
+24165,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E: phosphate -staghorn-stone', 'Readcode': '4G42.00'}"
+24933,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Dormia basket extraction of ureteric calculus', 'Readcode': '7B19212'}"
+24994,History of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'H/O: urinary stone', 'Readcode': '14D3.00'}"
+27592,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Hydronephrosis with renal and ureteral calculous obstruction', 'Readcode': 'K112.00'}"
+27786,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E: uric acid renal calculus', 'Readcode': '4G43.00'}"
+28514,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy for renal calculus NOS', 'Readcode': '7B0Bz00'}"
+28595,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other endoscopic extraction of bladder calculus', 'Readcode': '7B29100'}"
+28790,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Ureteroscopic laser fragmentation of ureteric calculus', 'Readcode': '7B18011'}"
+28953,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Endoscopic removal of urethral calculus', 'Readcode': '7B43900'}"
+29242,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Uric acid bladder stone', 'Readcode': '4G82.11'}"
+2939,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Calculous pyelonephritis', 'Readcode': 'K100600'}"
+29464,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy ureteric calculus NOS', 'Readcode': '7B1Cz00'}"
+29477,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy of ureteric calculus OS', 'Readcode': '7B1Cy00'}"
+31773,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Oxalate bladder stone', 'Readcode': '4G81.11'}"
+32858,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Phosphate kidney stone', 'Readcode': '4G42.11'}"
+3308,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Calculus of ureter', 'Readcode': 'K121.00'}"
+33746,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Calculus of kidney with calculus of ureter', 'Readcode': 'K122.00'}"
+33747,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': '[D]Renal colic NOS', 'Readcode': 'R080z00'}"
+34097,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Open urethrotomy and removal of calculus', 'Readcode': '7B42300'}"
+34139,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Endoscopic extraction of calculus of kidney nec', 'Readcode': '7B07400'}"
+3449,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy of ureteric calculus', 'Readcode': '7B1C.00'}"
+34584,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E: oxalate renal calculus', 'Readcode': '4G41.00'}"
+35743,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Cystoscopic catheter drainage for ureteric calculus', 'Readcode': '7B19300'}"
+36157,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Endoscopic ultrasound fragmentation of renal calculus', 'Readcode': '7B07011'}"
+3669,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Urinary calculus', 'Readcode': 'K12..12'}"
+36792,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Ureteroscopic laser lithotripsy of ureteric calculus', 'Readcode': '7B18000'}"
+36972,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Ureterolithiasis', 'Readcode': 'K121.13'}"
+37073,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Cystoscopic extraction of ureteric calculus', 'Readcode': '7B19200'}"
+38461,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E: renal stone NOS', 'Readcode': '4G4Z.00'}"
+38804,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Ureteroscopic extraction of ureteric calculus', 'Readcode': '7B18200'}"
+39048,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Cystoscopic dilation of ureter for drainage of calculus', 'Readcode': '7B19400'}"
+3906,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Renal calculus NOS', 'Readcode': 'K120z00'}"
+39511,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephroscopic laser lithotripsy of ureteric calculus', 'Readcode': '7B17000'}"
+40272,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Removal of bladder calculus by urethral catheter suction', 'Readcode': '7B2B400'}"
+4139,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Unspecified open removal of calculus from kidney', 'Readcode': '7B05000'}"
+41619,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephroscopy and ultrasound lithotripsy of renal calculus', 'Readcode': '7B07000'}"
+41871,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other cystoscopic fragmentation of ureteric calculus', 'Readcode': '7B19100'}"
+4216,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Cystoscopic removal of ureteric calculus', 'Readcode': '7B19.00'}"
+43350,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephroscopy and laser lithotripsy of renal calculus', 'Readcode': '7B07200'}"
+43744,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Uric acid nephrolithiasis', 'Readcode': 'C341100'}"
+44648,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Lower urinary tract calculus NOS', 'Readcode': 'K14z.00'}"
+45245,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E - urethral calculus', 'Readcode': '4G7..00'}"
+45673,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephroscopic extraction of ureteric calculus', 'Readcode': '7B17200'}"
+45765,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': '[X]Urolithiasis', 'Readcode': 'Kyu3.00'}"
+46291,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other lower urinary tract calculus', 'Readcode': 'K14y.00'}"
+47869,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Lower urinary tract calculus', 'Readcode': 'K14..00'}"
+4928,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Calculus of kidney', 'Readcode': 'K120.00'}"
+49783,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E: cystine renal calculus', 'Readcode': '4G44.00'}"
+51305,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorp shockwave lithotripsy of unspec ureteric calculus', 'Readcode': '7B1C000'}"
+52569,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Urinary calculus in schistosomiasis', 'Readcode': 'K1A..00'}"
+52721,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'ESWL for renal calculus less than 2 cm in diameter', 'Readcode': '7B0B100'}"
+5366,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Ureteroscopic operations for ureteric calculus', 'Readcode': '7B18.00'}"
+56462,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephroscopic percutaneous lithotripsy of renal calculus', 'Readcode': '7B07.11'}"
+5729,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Bladder calculus', 'Readcode': 'K140.00'}"
+58004,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephroscopic laser fragmentation of ureteric calculus', 'Readcode': '7B17011'}"
+58149,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Cystoscopic removal of ureteric calculus NOS', 'Readcode': '7B19z00'}"
+59834,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Bladder calculus NOS', 'Readcode': 'K140z00'}"
+60234,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Nephroscopy & electrohydraulic lithotripsy of renal calculus', 'Readcode': '7B07100'}"
+6048,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Ureteric stone', 'Readcode': 'K121.12'}"
+6087,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': '[D]Renal colic', 'Readcode': 'R080.00'}"
+6147,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': '[D]Ureteric colic', 'Readcode': 'R080100'}"
+61904,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave therapy for stone in upper ureter', 'Readcode': '7B1C100'}"
+640,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Renal colic', 'Readcode': '1A52.00'}"
+64699,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E - bladder calculus NOS', 'Readcode': '4G8Z.00'}"
+65920,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Phosphate bladder stone', 'Readcode': '4G83.11'}"
+66113,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy for renal calculus OS', 'Readcode': '7B0By00'}"
+66743,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other specified percutaneous renal stone surgery', 'Readcode': '7B07y00'}"
+67386,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Calculus in diverticulum of bladder', 'Readcode': 'K140000'}"
+6770,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Renal colic, symptom', 'Readcode': '1A52.11'}"
+6978,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E - bladder calculus', 'Readcode': '4G8..00'}"
+6979,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E: kidney stone', 'Readcode': '4G4..11'}"
+71131,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy stone in lower ureter', 'Readcode': '7B1C300'}"
+7119,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Percutaneous renal stone surgery NOS', 'Readcode': '7B07z00'}"
+72447,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other specified cystoscopic removal of ureteric calculus', 'Readcode': '7B19y00'}"
+74021,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E - vesical oxalate calculus', 'Readcode': '4G81.00'}"
+7682,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Extracorporeal shockwave lithotripsy for renal calculus', 'Readcode': '7B0B.00'}"
+8190,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Percutaneous renal stone surgery', 'Readcode': '7B07.00'}"
+8399,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E: renal calculus', 'Readcode': '4G4..00'}"
+8677,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Endoscopic laser fragmentation of renal calculus', 'Readcode': '7B07211'}"
+8777,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Kidney calculus', 'Readcode': 'K12..11'}"
+90777,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Open extraction of calculus from urethra', 'Readcode': '7B42400'}"
+9162,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Renal stone - uric acid', 'Readcode': 'C341111'}"
+9323,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Electrokinetic lithotripsy of bladder calculus', 'Readcode': '7B29400'}"
+93608,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'O/E-vesical uric acid calculus', 'Readcode': '4G82.00'}"
+94219,Procedure for Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'ESWL for renal calculus 2 cm or more in diameter', 'Readcode': '7B0B200'}"
+94420,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Other calculus in bladder', 'Readcode': 'K140100'}"
+9950,Diagnosis of Urolithiasis,Med codes,C1638,4415,Urolithiasis - Primary care,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'ReadcodeDescr': 'Calculus of kidney and ureter', 'Readcode': 'K12..00'}"
+N13.2,Hydronephrosis with renal and ureteral calculous obstruction,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N20.0,Calculus of kidney,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N20.1,Calculus of ureter,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N20.2,Calculus of kidney with calculus of ureter,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N20.9,"Urinary calculus, unspecified",ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N21.0,Calculus in bladder,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N21.1,Calculus in urethra,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N21.8,Other lower urinary tract calculus,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N21.9,"Calculus of lower urinary tract, unspecified",ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N22.8,Calculus of urinary tract in other diseases classified elsewhere,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+N23.X,Unspecified renal colic,ICD10 codes,C1639,4417,Urolithiasis - Secondary care - Diagnoses,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Diagnosis of Urolithiasis'}"
+M06.1,Open removal of calculus from kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M09,Therapeutic endoscopic operations on calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M09.1,Endoscopic ultrasound fragmentation of calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M09.2,Endoscopic electrohydraulic shockwave fragmentation of calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M09.3,Endoscopic laser fragmentation of calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M09.4,Endoscopic extraction of calculus of kidney NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M09.8,Other specified therapeutic endoscopic operations on calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M09.9,Unspecified therapeutic endoscopic operations on calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M14,Extracorporeal fragmentation of calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M14.1,Extracorporeal shock wave lithotripsy of calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M14.8,Other specified extracorporeal fragmentation of calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M14.9,Unspecified extracorporeal fragmentation of calculus of kidney,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M16.4,Percutaneous nephrolithotomy NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M23.1,Open ureterolithotomy,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M26.1,Nephroscopic laser fragmentation of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M26.2,Nephroscopic fragmentation of calculus of ureter NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M26.3,Nephroscopic extraction of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M27.1,Ureteroscopic laser fragmentation of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M27.2,Ureteroscopic fragmentation of calculus of ureter NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M27.3,Ureteroscopic extraction of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28,Other endoscopic removal of calculus from ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28.1,Endoscopic laser fragmentation of calculus of ureter NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28.2,Endoscopic fragmentation of calculus of ureter NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28.3,Endoscopic extraction of calculus of ureter NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28.4,Endoscopic catheter drainage of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28.5,Endoscopic drainage of calculus of ureter by dilation of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28.8,Other specified other endoscopic removal of calculus from ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M28.9,Unspecified other endoscopic removal of calculus from ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M31,Extracorporeal fragmentation of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M31.1,Extracorporeal shockwave lithotripsy of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M31.8,Other specified extracorporeal fragmentation of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M31.9,Unspecified extracorporeal fragmentation of calculus of ureter,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M39.1,Open removal of calculus from bladder,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M44.2,Endoscopic extraction of calculus of bladder NEC,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M75.4,Open extraction of calculus from urethra,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
+M86.1,Endoscopic extraction of calculus of urinary diversion,OPCS4 codes,C1640,4419,Urolithiasis - Secondary care - Procedures,PH331,662,Urolithiasis,"{'Disease': 'Urolithiasis', 'Category': 'Procedure for Urolithiasis'}"
\ No newline at end of file
diff --git a/example/phenotype_config.json b/example/phenotype_config.json
new file mode 100644
index 0000000..af73d02
--- /dev/null
+++ b/example/phenotype_config.json
@@ -0,0 +1,79 @@
+{
+    "concept_sets": {
+        "version": "1.0.0",
+        "omop": {
+            "vocabulary_id": "ACMC_Example",
+            "vocabulary_name": "ACMC example phenotype",
+            "vocabulary_reference": "https://www.it-innovation.soton.ac.uk/projects/meldb/concept-processing/example"
+        },
+        "concept_set": [
+            {
+                "concept_set_name": "ABDO_PAIN",
+                "concept_set_status": "AGREED",
+                "metadata": {
+                    "#": "18",
+                    "CONCEPT DESCRIPTION": "Abdominal pain",
+                    "CONCEPT TYPE": "Workload indicator (symptom)",
+                    "DATE ADDED ": "2023-08-25",
+                    "REQUEST REASON ": "Clinician SF - requested by email - symptom example from Qualitative Evidence Synthesis",
+                    "SOURCE INFO": "YES",
+                    "FUNCTION": "QUERY BY CODING LIST",
+                    "FUNCTION.1": "https://clinicalcodes.rss.mhs.man.ac.uk/",
+                    "CODING LIST": "https://git.soton.ac.uk/meld/meldb-external/phenotype/-/tree/main/codes/ClinicalCodes.org%20from%20the%20University%20of%20Manchester/Symptom%20code%20lists/Abdominal%20pain/res176-abdominal-pain.csv ",
+                    "NOTES": "2023-09-08: Clinical SF confirmed that the clinical view would be that this would need to be recurrent or persistent."
+                }
+            },
+		{
+			"concept_set_name": "CVD_EVENTS",
+			"concept_set_status": "AGREED",
+			"metadata": {
+				"#": "9",
+				"CONCEPT DESCRIPTION": "Cardiovascular events",
+				"CONCEPT TYPE": "Outcome event",
+				"CONCEPT ONTOLOGY CLASS": "nan",
+				"DATE ADDED ": "2023-08-25",
+				"REQUEST REASON ": "SF - requested by email - to explore an examplar 'outcome measure'",
+				"SOURCE INFO": "YES",
+				"FUNCTION": "QUERY BY CODING LIST",
+				"FUNCTION.1": "https://clinicalcodes.rss.mhs.man.ac.uk/",
+				"CODING LIST": "https://git.soton.ac.uk/meld/meldb-external/phenotype/-/tree/main/codes/ClinicalCodes.org%20from%20the%20University%20of%20Manchester/Cardiovascular%20events%20(ICD10)/res52-cardiovascular-events-icd10.csv",
+				"NOTES": "2023-11-17 - Code cannot currently be PROCESSED = COMPLETE as no mappings from ICD10 to Read v2 exist, pending confirmation from clinical team on next steps.",
+				"Relation to Ontology": "YES WITH ISSUES"
+			}
+		}
+        ]
+    },
+    "codes": [
+        {
+            "folder": "clinical-codes-org",
+            "description": "SF's clinical codes - downloaded 16/11/23",
+            "files": [
+                {
+                    "file": "Symptom code lists/Abdominal pain/res176-abdominal-pain.csv",
+                    "columns": {
+                        "read2": "code",
+                        "metadata": [
+                            "description"
+                        ]
+                    },
+                    "concept_set": [
+                        "ABDO_PAIN"
+                    ]
+                },
+		{
+			"file": "Cardiovascular events (ICD10)/res52-cardiovascular-events-icd10.csv",
+			"columns": {
+				"icd10_code": "code",
+				"metadata": [
+					"description"
+				]
+			},
+			"concept_set": [
+				"CVD_EVENTS"
+			]
+		}
+
+            ]
+        }
+    ]
+}
diff --git a/omop.py b/omop.py
index 160d4c3..6a9ecde 100644
--- a/omop.py
+++ b/omop.py
@@ -5,7 +5,7 @@ import pandas as pd
 
 from pathlib import Path
 
-OMOP_DB_DIR = Path('./codes/omop')
+OMOP_DB_DIR = Path('./build/omop')
 OMOP_DB_PATH = OMOP_DB_DIR / 'omop_54.sqlite'
 
 #Populate SQLite3 Database with default OMOP CONCEPTS 
-- 
GitLab