diff --git a/docs/index.md b/docs/index.md index 35182069a02f2e56ffe7cba91995463fec0a2ece..ee8456b15b75e5360b80638bb222970ece215d55 100644 --- a/docs/index.md +++ b/docs/index.md @@ -4,6 +4,7 @@ The high level steps to use the tools are outlined below: + **1. Define concept sets:** A domain expert defines a list of [concept sets](#defining-concept-sets) for each observable characteristic of the phenotype using CSV file format (e.g., `PHEN_concept_sets.csv`). **2. Define concept code lists for concept sets:** A domain expert defines [code lists](#defining-concept-codes) for each concept set within the phenotype using supported coding list formats and stores them in the `/src` directory.