From 2edc9684b05470ecac59d45ce1b24678dfd26ed5 Mon Sep 17 00:00:00 2001
From: Jakub Dylag <jjd1c23@soton.ac.uk>
Date: Fri, 21 Mar 2025 10:28:57 +0000
Subject: [PATCH] remove test for duplicated concept-set names
---
acmc/phen.py | 12 ++++++------
1 file changed, 6 insertions(+), 6 deletions(-)
diff --git a/acmc/phen.py b/acmc/phen.py
index 68316f4..f551113 100644
--- a/acmc/phen.py
+++ b/acmc/phen.py
@@ -511,12 +511,12 @@ def validate(phen_dir: str):
# create a list of all the concept set names defined in the concept set configuration
concept_set_names = []
for item in phenotype["concept_sets"]:
- if item["name"] in concept_set_names:
- validation_errors.append(
- f"Duplicate concept set defined in concept sets {item['name'] }"
- )
- else:
- concept_set_names.append(item["name"])
+ # if item["name"] in concept_set_names:
+ # validation_errors.append(
+ # f"Duplicate concept set defined in concept sets {item['name'] }"
+ # )
+ # else:
+ concept_set_names.append(item["name"])
# check codes definition
for item in phenotype["concept_sets"]:
--
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