diff --git a/.gitignore b/.gitignore
index 696ac578297675f612cfee0ea210012cd8bd90d4..b9563ca8a44431ecfb3b25c70df27a2616783549 100644
--- a/.gitignore
+++ b/.gitignore
@@ -19,6 +19,3 @@ _build
 Internship_Diary/*.pdf
 Internship_Diary/*.gz
 *.ipynb_checkpoints
-
-AmpScan/AmpScanGUI.py
-AmpScan/runAmpScanGUI.py
\ No newline at end of file
diff --git a/AmpScan/setup.py b/AmpScan/setup.py
index 19af595d9d857812af1e4c8be2147e89117517ed..51a53df85df93fd92730e49116a6bda7d130b8ac 100644
--- a/AmpScan/setup.py
+++ b/AmpScan/setup.py
@@ -3,6 +3,7 @@
 Created on Tue Mar 27 15:54:27 2018
 
 @author: js22g12
+Note that this file does not need to be documented.
 """
 
 from distutils.core import setup
diff --git a/docs/source/AmpScan.rst b/docs/source/AmpScan.rst
index fed7286da59c060f388d78d8d38d7abe3f66f7fa..2e807696b569eae1d8b9321f169567d40cb3d43c 100644
--- a/docs/source/AmpScan.rst
+++ b/docs/source/AmpScan.rst
@@ -68,6 +68,14 @@ AmpScan.registration module
     :undoc-members:
     :show-inheritance:
 
+AmpScan.smooth module
+---------------------
+
+.. automodule:: AmpScan.smooth
+    :members:
+    :undoc-members:
+    :show-inheritance:
+
 
 Module contents
 ---------------