Commits · master · Computational Genetics / Zalpha

04 Feb, 2021 2 commits
- Update LICENSE · ba15a485
  Reuben Pengelly authored Feb 04, 2021
  
  ba15a485
- Update README.md · 6b498069
  Reuben Pengelly authored Feb 04, 2021
  
  6b498069
05 Dec, 2020 1 commit
- Added doi for Maynard Smith and Sabeti papers · 9cd99032
  Clare authored Dec 05, 2020
  
  9cd99032
01 Dec, 2020 1 commit
- Added the doi for the Gautier paper · 0ea73d5d
  Clare authored Dec 01, 2020
  
  0ea73d5d
23 Nov, 2020 1 commit
- Added more detail to the final paragraph · 7c6ddca8
  Clare authored Nov 23, 2020
  
  7c6ddca8
09 Nov, 2020 6 commits
- Merge branch 'master' of github.com:chorscroft/zalpha · 795ea6e5
  Clare authored Nov 09, 2020
  
  795ea6e5
- Edit Travis link · 6657db9f
  Clare authored Nov 09, 2020
  
  6657db9f
- Added a paragraph and references about other packages · cd6e8a52
  Clare authored Nov 09, 2020
  
  cd6e8a52
- Update README.md · f5101957
  Clare authored Nov 09, 2020
  
  f5101957
- Update README.md · 13c6f70b
  Clare authored Nov 09, 2020
```
Edit travis link
```
  13c6f70b
- Add Travis badge to README · b4029732
  Clare authored Nov 09, 2020
  
  b4029732
08 Nov, 2020 2 commits
- Added a section on dependencies · ce245c14
  Clare authored Nov 08, 2020
  
  ce245c14
- Created .travis.yml · aeaa6bd5
  Clare authored Nov 08, 2020
  
  aeaa6bd5
29 Oct, 2020 1 commit
- Now includes community guidelines section · 604d2287
  Clare authored Oct 29, 2020
  
  604d2287
15 Sep, 2020 4 commits
- Added note about the changes to how max_bin is handled · db62d3c4
  Clare authored Sep 15, 2020
  
  db62d3c4
- Added documentation about max_dist · bbabd7a7
  Clare authored Sep 15, 2020
  
  bbabd7a7
- Added test for when a pair of SNPs in a window have a genetic distance greater... · eddb955b
  Clare authored Sep 15, 2020
```
Added test for when a pair of SNPs in a window have a genetic distance greater than the maximum bin in the LD profile
```
  eddb955b
- Added code to force pairs of SNPs with a genetic distance greater than the... · ddefe8ab
  Clare authored Sep 15, 2020
```
Added code to force pairs of SNPs with a genetic distance greater than the biggest bin in the LD profile into the maximum bin
```
  ddefe8ab
08 Sep, 2020 4 commits
- New developments to functions equal_vector, L_plus_R and Zalpha_all · eae5989f
  Clare authored Sep 08, 2020
  
  eae5989f
- Moved calculation of LR and L_plus_R so they are always calculated. Edit to... · fbb6ba2e
  Clare authored Sep 08, 2020
```
Moved calculation of LR and L_plus_R so they are always calculated. Edit to final warning to not reference LR
```
  fbb6ba2e
- Added definition of L and R to Zalpha_all documentation · 8bb8fce2
  Clare authored Sep 08, 2020
  
  8bb8fce2
- Chnage to L_plus_R so that it will return zero rather than NA when n<2 in choose(n,2) · 138ce99c
  Clare authored Sep 08, 2020
  
  138ce99c
08 Aug, 2020 1 commit
- Updated date · 09a03dcf
  Clare authored Aug 08, 2020
  
  09a03dcf
07 Aug, 2020 1 commit
- Minor wording changes · a3e0b371
  Clare authored Aug 07, 2020
  
  a3e0b371
04 Aug, 2020 1 commit
- Added Tim's ORCiD · afa3e49a
  Clare authored Aug 05, 2020
  
  afa3e49a
30 Jul, 2020 1 commit
- Added ORCiDs and made minor text changes · 076f9f99
  Clare authored Jul 31, 2020
  
  076f9f99
29 Jul, 2020 6 commits
- Mention of phased data · bddbe148
  Clare authored Jul 29, 2020
  
  bddbe148
- Updated statement of need and reworded sentences · 778af545
  Clare authored Jul 29, 2020
  
  778af545
- Remove quotes around references · 1ebaa445
  Clare authored Jul 29, 2020
  
  1ebaa445
- added "ands" between authors · cc84f712
  Clare authored Jul 29, 2020
  
  cc84f712
- Change code to be more efficient · 5b921472
  Clare authored Jul 29, 2020
  
  5b921472
- Ignore paper folder · 01c0f7be
  Clare authored Jul 29, 2020
  
  01c0f7be
28 Jul, 2020 3 commits
- Increment version for development · 3e7c7d7c
  Clare authored Jul 28, 2020
  
  3e7c7d7c
- Update version to 0.2.0 · fc1d6dd0
  Clare authored Jul 28, 2020
  
  fc1d6dd0
- Updated to version 0.2.0 · 5ca601c5
  Clare authored Jul 28, 2020
  
  5ca601c5
26 Jul, 2020 1 commit
- First draft of paper · ee7fc323
  Clare authored Jul 26, 2020
  
  ee7fc323
22 Jul, 2020 2 commits
- Removed NEWS.md · ed5690c9
  Clare authored Jul 22, 2020
  
  ed5690c9
- New comments for tests on new version · 4bde0f7b
  Clare authored Jul 22, 2020
  
  4bde0f7b
15 Jul, 2020 1 commit
- Added reference to PLINK, clarified missing values and edited sentence on correlation causes · 3a76a940
  Clare authored Jul 15, 2020
  
  3a76a940
14 Jul, 2020 1 commit
- Edited description of function and format of @seealso section of documentation · e6706b1a
  Clare authored Jul 14, 2020
  
  e6706b1a